RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1001940" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1001940 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30128843 30128843 PRJNA1001940_S_NODE_188572_length_158_cov_1.252174_g187518_i0 PRJNA1001940 188572 158 1.252174 1.97843492 Terriglobales bacterium 2282142 Bacteria Bacteria 41.2 0.0411   NR HSS98571.1 2282142 g187518 i0 46.5 0.816455696202532 43 23 81.6 0 144 16 216 258 HSS98571.1 cytochrome c oxidase subunit II [Terriglobales bacterium] diamond 129 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
32469050 32469050 PRJNA1001940_S_NODE_85879_length_234_cov_3.104712_g84825_i0 PRJNA1001940 85879 234 3.104712 7.26502608 Terriglobia bacterium 2081523 Bacteria Bacteria 42.4 0.0463   NR HET9179585.1 2081523 g84825 i0 46.5 0.551282051282051 43 23 55.1 0 150 22 391 433 HET9179585.1 thioredoxin domain-containing protein [Terriglobia bacterium] diamond 129 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;