RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA1001940" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 1 ✖

bioproject 1

  • PRJNA1001940 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29591857 29591857 PRJNA1001940_S_NODE_118090_length_199_cov_3.455128_g117036_i0 PRJNA1001940 118090 199 3.455128 6.87570472 Polycipiviridae sp. 2496155 Viruses Viruses 58.2 7.81e-8   NR XCO48609.1 2496155 g117036 i0 42.1 2.60804020100502 57 33 85.9 0 190 20 1930 1986 XCO48609.1 MAG: putative ORF5 protein, partial [Polycipiviridae sp.] diamond 519 58.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Polycipiviridae   Polycipiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;