RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1000943" and tax_phylum = "Lenarviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1000943 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28202744 28202744 PRJNA1000943_P_NODE_10366_length_260_cov_1.668449_g10228_i0 PRJNA1000943 10366 260 1.668449 4.3379674 Leviviridae sp. 2027243 Viruses Viruses 93.6 5.96e-20   NR UJQ85965.1 2027243 g10228 i0 62.4 0.980769230769231 85 32 98.1 0 5 259 323 407 UJQ85965.1 MAG: putative replicase protein [Leviviridae sp.] diamond 255 93.6 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
29718273 29718273 PRJNA1000943_P_NODE_210_length_1372_cov_3.070824_g166_i0 PRJNA1000943 210 1372 3.070824 42.13170528 Narnavirus sp. 2587225 Viruses Viruses 55.5 7.16e-5   NR YP_010798348.1 2587225 g166 i0 32.2 0.25801749271137 118 72 24.7 3 1338 1000 22 136 YP_010798348.1 MAG: hypothetical protein QKN93_gp3 [Narnavirus sp.] diamond 354 55.5 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
29781636 29781636 PRJNA1000943_P_NODE_211_length_1371_cov_3.275809_g167_i0 PRJNA1000943 211 1371 3.275809 44.91134139 Narnavirus sp. 2587225 Viruses Viruses 127 3.72e-27   NR YP_010798350.1 2587225 g167 i0 28 0.774617067833698 354 238 75.3 7 1366 335 1312 1658 YP_010798350.1 MAG: RNA-dependent RNA polymerase [Narnavirus sp.] diamond 1062 127 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
31804218 31804218 PRJNA1000943_P_NODE_17_length_2542_cov_3.486837_g15_i0 PRJNA1000943 17 2542 3.486837 88.63539654 Narnavirus sp. 2587225 Viruses Viruses 251 5.83e-71   NR YP_010798347.1 2587225 g15 i0 34 0.49567269866247 420 252 47.8 8 1890 676 28 437 YP_010798347.1 MAG: hypothetical protein QKN93_gp2 [Narnavirus sp.] diamond 1260 251 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;