RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJEB8827" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB8827 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25666258 25666258 PRJEB8827h_S_NODE_1402_length_261_cov_1567.553097_g1383_i0 PRJEB8827 1402 261 1567.553097 4091.31358317 Metazoa 33208 Mollusca Mollusca 85.1 1.36e-19   NR XP_021374431.1 6573 g1383 i0 76.3 5.5632183908046 59 11 67.8 1 259 83 19 74 XP_021374431.1 60S ribosomal protein L38 [Mizuhopecten yessoensis] diamond 1452 85.5 0.9953216374269 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
31804198 31804198 PRJEB8827_P_NODE_257_length_333_cov_287.088816_g235_i0 PRJEB8827 257 333 287.088816 956.00575728 Acanthosepion pharaonis 158019 Mollusca Mollusca 48.9 7.53e-4   NR CAE1236275.1 158019 g235 i0 47.8 0.828828828828829 92 40 78.4 4 60 320 2123 2211 CAE1236275.1 unnamed protein product [Acanthosepion pharaonis] diamond 276 48.9 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis
32991867 32991867 PRJEB8827h_S_NODE_13611_length_187_cov_5.361842_g13592_i0 PRJEB8827 13611 187 5.361842 10.02664454 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 42.7 0.015   NR XP_046354537.1 6454 g13592 i0 48.1 3.94652406417112 52 27 83.4 0 2 157 155 206 XP_046354537.1 60S ribosomal protein L13-like [Haliotis rufescens] diamond 738 43.1 0.990719257540603 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
33016438 33016438 PRJEB8827b_S_NODE_13324_length_189_cov_2.240260_g13272_i0 PRJEB8827 13324 189 2.24026 4.2340914 Mercenaria mercenaria 6596 Mollusca Mollusca 61.2 3e-10   NR XP_045157640.1 6596 g13272 i0 71.8 1.88888888888889 39 11 61.9 0 188 72 66 104 XP_045157640.1 thioredoxin-like [Mercenaria mercenaria] diamond 357 61.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
33042909 33042909 PRJEB8827f_S_NODE_900_length_377_cov_4.345029_g880_i0 PRJEB8827 900 377 4.345029 16.38075933 Mytilus 6548 Mollusca Mollusca 44.7 0.0339   NR CAG2212025.1 6550 g880 i0 29.5 1.51193633952255 95 56 75.6 2 6 290 653 736 CAG2212025.1 unnamed protein product [Mytilus edulis] diamond 570 45.1 0.991130820399113 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
33102055 33102055 PRJEB8827h_S_NODE_44846_length_157_cov_2.950820_g44827_i0 PRJEB8827 44846 157 2.95082 4.6327874 Candidula unifasciata 100452 Mollusca Mollusca 45.4 5.38e-4   NR CAG5119186.1 100452 g44827 i0 46.5 0.821656050955414 43 21 82.2 2 9 137 99 139 CAG5119186.1 unnamed protein product [Candidula unifasciata] diamond 129 45.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata
33111082 33111082 PRJEB8827h_S_NODE_41894_length_162_cov_4.291339_g41875_i0 PRJEB8827 41894 162 4.291339 6.95196918 Metazoa 33208 Mollusca Mollusca 52.8 3.28e-6   NR XP_045181538.2 6596 g41875 i0 72.7 2.81481481481481 44 10 81.5 1 154 23 253 294 XP_045181538.2 60S ribosomal protein L5-like [Mercenaria mercenaria] diamond 456 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
33135838 33135838 PRJEB8827c_S_NODE_191_length_266_cov_4.160173_g178_i0 PRJEB8827 191 266 4.160173 11.06606018 Haliotis asinina 109174 Mollusca Mollusca 43.9 0.0183   NR XP_067657806.1 109174 g178 i0 35.4 1.44360902255639 65 36 72.2 2 238 47 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;