RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJEB8827" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 7 ✖

bioproject 1

  • PRJEB8827 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32948422 32948422 PRJEB8827f_S_NODE_2290_length_279_cov_169.950820_g2270_i0 PRJEB8827 2290 279 169.95082 474.1627878 Microcoleus sp. herbarium8 3055436 Bacteria Bacteria 44.3 0.0163   NR WP_333425006.1 3055436 g2270 i0 40.7 2.13978494623656 59 33 63.4 1 35 211 28 84 WP_333425006.1 CHAT domain-containing protein, partial [Microcoleus sp. herbarium8] diamond 597 44.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae Microcoleus Microcoleus sp. herbarium8
33016447 33016447 PRJEB8827b_S_NODE_7748_length_199_cov_4.365854_g7696_i0 PRJEB8827 7748 199 4.365854 8.68804946 Calothrix sp. PCC 63 1187 Bacteria Bacteria 39.7 0.0437   NR WP_015199565.1 1170562 g7696 i0 66.7 0.361809045226131 24 8 36.2 0 189 118 7 30 WP_015199565.1 hypothetical protein [Calothrix sp. PCC 6303] diamond 72 39.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Calotrichaceae Calothrix Calothrix sp. PCC 6303
33119047 33119047 PRJEB8827h_S_NODE_20031_length_182_cov_5.714286_g20012_i0 PRJEB8827 20031 182 5.714286 10.40000052 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 80.5 3.59e-17   NR MBX9724270.1 2364082 g20012 i0 97.4 0.642857142857143 39 1 64.3 0 180 64 132 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 117 80.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
33128209 33128209 PRJEB8827e_S_NODE_2663_length_261_cov_2.212389_g2635_i0 PRJEB8827 2663 261 2.212389 5.77433529 Bacteria 2 Bacteria Bacteria 47.4 0.00103   NR TAD78437.1 1151 g2635 i0 40 8.4367816091954 45 27 51.7 0 259 125 281 325 TAD78437.1 MAG: tetratricopeptide repeat protein [Oscillatoriales cyanobacterium] diamond 2202 47.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales     Oscillatoriales cyanobacterium
33135839 33135839 PRJEB8827c_S_NODE_575_length_201_cov_2.156627_g562_i0 PRJEB8827 575 201 2.156627 4.33482027 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 129 4.13e-36   NR MBX9724270.1 2364082 g562 i0 98.4 0.925373134328358 62 1 92.5 0 199 14 109 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 186 129 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
33170101 33170101 PRJEB8827e_S_NODE_42368_length_153_cov_1.016949_g42340_i0 PRJEB8827 42368 153 1.016949 1.55593197 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 49.3 4.46e-5   NR MBI2811608.1 2052166 g42340 i0 72.3 0.92156862745098 47 13 92.2 0 2 142 27 73 MBI2811608.1 hypothetical protein [Candidatus Melainabacteria bacterium] diamond 141 49.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
33170321 33170321 PRJEB8827g_S_NODE_6632_length_169_cov_3.910448_g6611_i0 PRJEB8827 6632 169 3.910448 6.60865712 Microcystis aeruginosa PCC 78 1126 Bacteria Bacteria 45.4 0.00123   NR ARI79959.1 1903187 g6611 i0 52.8 0.63905325443787 36 17 63.9 0 7 114 33 68 ARI79959.1 hypothetical protein BH695_0678 [Microcystis aeruginosa PCC 7806SL] diamond 108 45.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis aeruginosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;