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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJEB83711" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB83711 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18850150 18850150 PRJEB83711_P_NODE_22535_length_374_cov_1.375415_g22269_i0 PRJEB83711 22535 374 1.375415 5.1440521 Chelydra serpentina 8475 Chordata Chordata 177 3.53e-53   NR KAG6930089.1 8475 g22269 i0 75.2 4.85294117647059 121 30 97.1 0 372 10 129 249 KAG6930089.1 hypothetical protein G0U57_004388, partial [Chelydra serpentina] diamond 1815 177 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Chelydridae Chelydra Chelydra serpentina
26844712 26844712 PRJEB83711_P_NODE_61741_length_251_cov_0.876404_g61475_i0 PRJEB83711 61741 251 0.876404 2.19977404 Myotis brandtii 109478 Chordata Chordata 56.6 5.28e-7   NR EPQ09303.1 109478 g61475 i0 49.1 2.54581673306773 53 26 62.2 1 79 234 63 115 EPQ09303.1 Cytochrome P450 2B11 [Myotis brandtii] diamond 639 56.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Vespertilionidae Myotis Myotis brandtii
26970924 26970924 PRJEB83711_P_NODE_16902_length_430_cov_4.512605_g16636_i0 PRJEB83711 16902 430 4.512605 19.4042015 Erpetoichthys calabaricus 27687 Chordata Chordata 142 4.37e-38   NR XP_051791274.1 27687 g16636 i0 60.4 6.78837209302326 139 27 96.3 2 17 430 115 226 XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] diamond 2919 142 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
27255536 27255536 PRJEB83711_P_NODE_76023_length_243_cov_1.388235_g75757_i0 PRJEB83711 76023 243 1.388235 3.37341105 Phrynocephalus forsythii 171643 Chordata Chordata 150 7.87e-41   NR KAJ7313892.1 171643 g75757 i0 93.8 0.987654320987654 80 5 98.8 0 241 2 214 293 KAJ7313892.1 hypothetical protein JRQ81_005671 [Phrynocephalus forsythii] diamond 240 150 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Agamidae Phrynocephalus Phrynocephalus forsythii
27382125 27382125 PRJEB83711_P_NODE_44703_length_278_cov_1.278049_g44437_i0 PRJEB83711 44703 278 1.278049 3.55297622 Ovis ammon polii x Ovis aries 2918886 Chordata Chordata 72.4 1.35e-12   NR KAI4586026.1 2918886 g44437 i0 79.2 0.517985611510791 48 10 51.8 0 278 135 34 81 KAI4586026.1 hypothetical protein MJG53_003813 [Ovis ammon polii x Ovis aries] diamond 144 72.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis ammon polii x Ovis aries
27571454 27571454 PRJEB83711_P_NODE_67024_length_248_cov_0.891429_g66758_i0 PRJEB83711 67024 248 0.891429 2.21074392 Eublepharis macularius 481883 Chordata Chordata 55.5 1.27e-6   NR XP_054852797.1 481883 g66758 i0 36.1 0.870967741935484 72 46 87.1 0 7 222 200 271 XP_054852797.1 uncharacterized protein LOC129341561 isoform X1 [Eublepharis macularius] diamond 216 55.5 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Eublepharidae Eublepharis Eublepharis macularius
27627427 27627427 PRJEB83711_P_NODE_61244_length_251_cov_0.876404_g60978_i0 PRJEB83711 61244 251 0.876404 2.19977404 root 1 Root_unresolved Root_unresolved 48.1 1.14e-4   NR CAI5777507.1 74358 g60978 i0 80 3.28685258964143 25 5 29.9 0 126 200 56 80 CAI5777507.1 Hypothetical predicted protein [Podarcis lilfordi] diamond 825 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Lacertidae Podarcis Podarcis lilfordi
27753775 27753775 PRJEB83711_P_NODE_55764_length_256_cov_1.371585_g55498_i0 PRJEB83711 55764 256 1.371585 3.5112576 Rodentia 9989 Chordata Chordata 44.7 0.00919   NR NP_032602.1 10090 g55498 i0 71.7 28.34765625 46 13 53.9 0 114 251 1430 1475 NP_032602.1 multidrug resistance-associated protein 1 isoform 1 [Mus musculus] diamond 7257 45.1 0.991130820399113 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
27981974 27981974 PRJEB83711_P_NODE_19945_length_396_cov_3.297214_g19679_i0 PRJEB83711 19945 396 3.297214 13.05696744 Polypterus senegalus 55291 Chordata Chordata 43.5 0.0337   NR KAG2471189.1 55291 g19679 i0 57.1 0.265151515151515 35 15 26.5 0 196 92 92 126 KAG2471189.1 TCB1 transposase, partial [Polypterus senegalus] diamond 105 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
28045030 28045030 PRJEB83711_P_NODE_44565_length_278_cov_1.687805_g44299_i0 PRJEB83711 44565 278 1.687805 4.6920979 Phrynocephalus forsythii 171643 Chordata Chordata 177 1.24e-50   NR KAJ7319640.1 171643 g44299 i0 84.6 1.96402877697842 91 14 98.2 0 4 276 474 564 KAJ7319640.1 hypothetical protein JRQ81_019151 [Phrynocephalus forsythii] diamond 546 177 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Agamidae Phrynocephalus Phrynocephalus forsythii
28985242 28985242 PRJEB83711_P_NODE_54808_length_258_cov_0.978378_g54542_i0 PRJEB83711 54808 258 0.978378 2.52421524 Anura 8342 Chordata Chordata 45.1 0.00663   NR XP_041429831.1 8355 g54542 i0 35.7 2.97674418604651 84 54 97.7 0 3 254 334 417 XP_041429831.1 uncharacterized protein LOC121397286 [Xenopus laevis] diamond 768 45.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
29244918 29244918 PRJEB83711_P_NODE_64969_length_249_cov_0.886364_g64703_i0 PRJEB83711 64969 249 0.886364 2.20704636 Ranitomeya imitator 111125 Chordata Chordata 52.4 1.55e-5   NR XP_069604432.1 111125 g64703 i0 34.7 0.903614457831325 75 49 90.4 0 20 244 218 292 XP_069604432.1 uncharacterized protein [Ranitomeya imitator] diamond 225 52.4 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
30160491 30160491 PRJEB83711_P_NODE_17452_length_424_cov_0.789174_g17186_i0 PRJEB83711 17452 424 0.789174 3.34609776 Xenopus laevis 8355 Chordata Chordata 65.5 2.82e-9   NR XP_041429831.1 8355 g17186 i0 40 1.69103773584906 115 69 81.4 0 350 6 311 425 XP_041429831.1 uncharacterized protein LOC121397286 [Xenopus laevis] diamond 717 65.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
30287501 30287501 PRJEB83711_P_NODE_32992_length_313_cov_5.350000_g32726_i0 PRJEB83711 32992 313 5.35 16.7455 Staurois parvus 386267 Chordata Chordata 59.7 1.79e-9   NR CAI9620946.1 386267 g32726 i0 70.3 0.354632587859425 37 11 35.5 0 239 129 23 59 CAI9620946.1 unnamed protein product [Staurois parvus] diamond 111 59.7 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
30887433 30887433 PRJEB83711_P_NODE_59334_length_252_cov_1.240223_g59068_i0 PRJEB83711 59334 252 1.240223 3.12536196 Physeter macrocephalus 9755 Chordata Chordata 43.5 0.0218   NR XP_028353933.1 9755 g59068 i0 36.6 0.845238095238095 71 40 81 2 245 42 493 561 XP_028353933.1 coiled-coil domain-containing protein 57 [Physeter macrocephalus] diamond 213 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Physeteridae Physeter Physeter macrocephalus
31013787 31013787 PRJEB83711_P_NODE_68995_length_247_cov_0.896552_g68729_i0 PRJEB83711 68995 247 0.896552 2.21448344 Mobula hypostoma 723540 Chordata Chordata 53.1 8.1e-6   NR XP_062916020.1 723540 g68729 i0 39.7 0.88663967611336 73 42 86.2 1 3 215 511 583 XP_062916020.1 nesprin-2 isoform X2 [Mobula hypostoma] diamond 219 53.1 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Myliobatiformes Myliobatidae Mobula Mobula hypostoma
31202912 31202912 PRJEB83711_P_NODE_43895_length_280_cov_1.086957_g43629_i0 PRJEB83711 43895 280 1.086957 3.0434796 Bufotes viridis 30338 Chordata Chordata 50.1 9.04e-5   NR CAK8623450.1 30338 g43629 i0 90 0.321428571428571 30 3 32.1 0 158 247 157 186 CAK8623450.1 hypothetical protein BUFVIR_LOCUS12817 [Bufotes viridis] diamond 90 50.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
31519828 31519828 PRJEB83711_P_NODE_67076_length_248_cov_0.891429_g66810_i0 PRJEB83711 67076 248 0.891429 2.21074392 Natator depressus 27790 Chordata Chordata 142 1.13e-39   NR CAM5079620.1 27790 g66810 i0 80.2 12.7379032258065 81 16 98 0 246 4 89 169 CAM5079620.1 unnamed protein product [Natator depressus] diamond 3159 142 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Cheloniidae Natator Natator depressus
31614541 31614541 PRJEB83711_P_NODE_80516_length_236_cov_2.245399_g80250_i0 PRJEB83711 80516 236 2.245399 5.29914164 Phrynocephalus forsythii 171643 Chordata Chordata 118 3.5099999999999997e-32   NR KAJ7313365.1 171643 g80250 i0 81.3 1.90677966101695 75 13 94.1 1 2 223 53 127 KAJ7313365.1 hypothetical protein JRQ81_004662 [Phrynocephalus forsythii] diamond 450 118 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Agamidae Phrynocephalus Phrynocephalus forsythii
32089066 32089066 PRJEB83711_P_NODE_65838_length_249_cov_0.886364_g65572_i0 PRJEB83711 65838 249 0.886364 2.20704636 Leptonychotes weddellii 9713 Chordata Chordata 77 3.21e-14   NR XP_030877726.1 9713 g65572 i0 60.8 0.891566265060241 74 28 88 1 240 22 184 257 XP_030877726.1 FH1/FH2 domain-containing protein 3-like, partial [Leptonychotes weddellii] diamond 222 77 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Phocidae Leptonychotes Leptonychotes weddellii
32657842 32657842 PRJEB83711_P_NODE_74540_length_244_cov_0.912281_g74274_i0 PRJEB83711 74540 244 0.912281 2.22596564 Phocoena sinus 42100 Chordata Chordata 49.3 1.79e-4   NR XP_032466749.1 42100 g74274 i0 54.5 0.540983606557377 44 16 54.1 1 88 219 295 334 XP_032466749.1 WD repeat and FYVE domain-containing protein 2 isoform X4 [Phocoena sinus] diamond 132 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Phocoenidae Phocoena Phocoena sinus
32745398 32745398 PRJEB83711_P_NODE_74220_length_244_cov_0.912281_g73954_i0 PRJEB83711 74220 244 0.912281 2.22596564 Squamata 8509 Chordata Chordata 45.8 0.00271   NR XP_003220483.1 28377 g73954 i0 85.2 1.32786885245902 27 4 33.2 0 243 163 227 253 XP_003220483.1 ATP synthase F(0) complex subunit B1, mitochondrial [Anolis carolinensis] diamond 324 45.8 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Dactyloidae Anolis Anolis carolinensis
32752650 32752650 PRJEB83711_P_NODE_53480_length_260_cov_1.663102_g53214_i0 PRJEB83711 53480 260 1.663102 4.3240652 Staurois parvus 386267 Chordata Chordata 87.8 2.45e-20   NR CAI9547784.1 386267 g53214 i0 50.7 0.865384615384615 75 37 86.5 0 1 225 15 89 CAI9547784.1 unnamed protein product, partial [Staurois parvus] diamond 225 87.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
32847038 32847038 PRJEB83711_P_NODE_70280_length_246_cov_1.156069_g70014_i0 PRJEB83711 70280 246 1.156069 2.84392974 Phrynocephalus forsythii 171643 Chordata Chordata 91.7 1.16e-19   NR KAJ7311176.1 171643 g70014 i0 67.1 0.890243902439024 73 24 89 0 24 242 290 362 KAJ7311176.1 hypothetical protein JRQ81_006783 [Phrynocephalus forsythii] diamond 219 91.7 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Agamidae Phrynocephalus Phrynocephalus forsythii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;