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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJEB83101" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 13 ✖

bioproject 1

  • PRJEB83101 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7794071 7794071 PRJEB83101_P_NODE_35327_length_312_cov_1.966527_g35022_i0 PRJEB83101 35327 312 1.966527 6.13556424 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 166 2.81e-51   NR KAL0582086.1 65357 g35022 i0 100 0.846153846153846 88 0 84.6 0 265 2 1 88 KAL0582086.1 hypothetical protein ABG067_008272, partial [Albugo candida] diamond 264 166 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
24367790 24367790 PRJEB83101_P_NODE_44980_length_285_cov_1.334906_g44675_i0 PRJEB83101 44980 285 1.334906 3.8044821 Ochromonas danica 2986 SAR_Eukaryotes SAR_Eukaryotes 155 7.839999999999999e-43   NR NP_066417.1 2986 g44675 i0 84.2 2 95 15 100 0 285 1 252 346 NP_066417.1 NADH dehydrogenase subunit 4 [Ochromonas danica] diamond 570 155 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas danica
26900509 26900509 PRJEB83101_P_NODE_60041_length_260_cov_1.401070_g59736_i0 PRJEB83101 60041 260 1.40107 3.642782 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 91.7 2.95e-19   NR XP_013230538.1 5802 g59736 i0 58.2 2.16923076923077 91 33 99.2 2 260 3 2101 2191 XP_013230538.1 leucine rich repeat containing protein / ankyrin repeat containing protein, putative [Eimeria tenella] diamond 564 91.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
27666371 27666371 PRJEB83101_P_NODE_85944_length_242_cov_0.923077_g85639_i0 PRJEB83101 85944 242 0.923077 2.23384634 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 92 1.66e-19   NR KAJ1438196.1 483371 g85639 i0 57.3 0.929752066115702 75 32 93 0 242 18 797 871 KAJ1438196.1 RNA dependent RNA polymerase-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 225 92 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
27666373 27666373 PRJEB83101_P_NODE_88604_length_235_cov_2.074074_g88299_i0 PRJEB83101 88604 235 2.074074 4.8740739 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00377   NR KAF1326870.1 82926 g88299 i0 41.3 1.60851063829787 63 33 75.3 1 188 12 102 164 KAF1326870.1 reverse transcriptase, partial [Globisporangium splendens] diamond 378 45.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28171317 28171317 PRJEB83101_P_NODE_43686_length_287_cov_1.822430_g43381_i0 PRJEB83101 43686 287 1.82243 5.2303741 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 90.5 7.26e-19   NR XP_001022895.3 312017 g43381 i0 42.1 0.993031358885017 95 55 99.3 0 286 2 329 423 XP_001022895.3 26S proteasome non-ATPase regulatory subunit [Tetrahymena thermophila SB210] diamond 285 90.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
29087143 29087143 PRJEB83101_P_NODE_70468_length_250_cov_0.881356_g70163_i0 PRJEB83101 70468 250 0.881356 2.20339 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 53.5 1.11e-6   NR KAJ1435638.1 483371 g70163 i0 66.7 0.396 33 11 39.6 0 152 250 68 100 KAJ1435638.1 hypothetical protein B484DRAFT_393444 [Ochromonadaceae sp. CCMP2298] diamond 99 53.5 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
29143069 29143069 PRJEB83101_P_NODE_53449_length_270_cov_1.807107_g53144_i0 PRJEB83101 53449 270 1.807107 4.8791889 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 143 1.4299999999999998e-37   NR KAL4453968.1 5901 g53144 i0 74.4 6.97777777777778 90 23 100 0 1 270 401 490 KAL4453968.1 hypothetical protein ABPG74_003851 [Tetrahymena malaccensis] diamond 1884 143 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
29489982 29489982 PRJEB83101_P_NODE_78270_length_246_cov_0.901734_g77965_i0 PRJEB83101 78270 246 0.901734 2.21826564 Symbiodiniaceae 252141 SAR_Eukaryotes SAR_Eukaryotes 109 2.79e-26   NR CAE7529802.1 631055 g77965 i0 58.5 4.97560975609756 82 34 100 0 1 246 103 184 CAE7529802.1 DEGP1 [Symbiodinium sp. CCMP2592] diamond 1224 109 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium sp. CCMP2592
29710778 29710778 PRJEB83101_P_NODE_73270_length_249_cov_0.886364_g72965_i0 PRJEB83101 73270 249 0.886364 2.20704636 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 73.6 5.41e-13   NR XP_024571821.1 4781 g72965 i0 52.8 29.9397590361446 72 29 86.7 2 32 247 194 260 XP_024571821.1 -dimethylguanosine trna methyltransferase [Plasmopara halstedii] diamond 7455 74.3 0.990578734858681 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
30792573 30792573 PRJEB83101_P_NODE_85854_length_242_cov_0.923077_g85549_i0 PRJEB83101 85854 242 0.923077 2.23384634 Symbiodinium sp. CCMP2456 1519616 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00795   NR CAE7722823.1 1519616 g85549 i0 35.5 1.88429752066116 76 34 76.9 2 56 241 724 798 CAE7722823.1 unnamed protein product, partial [Symbiodinium sp. CCMP2456] diamond 456 44.7 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium sp. CCMP2456
32152397 32152397 PRJEB83101_P_NODE_33078_length_321_cov_1.741935_g32773_i0 PRJEB83101 33078 321 1.741935 5.59161135 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 151 1.68e-45   NR KAL0570125.1 65357 g32773 i0 90.5 0.785046728971963 84 8 78.5 0 305 54 1 84 KAL0570125.1 hypothetical protein ABG067_009442, partial [Albugo candida] diamond 252 151 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
32366679 32366679 PRJEB83101_P_NODE_86579_length_242_cov_0.923077_g86274_i0 PRJEB83101 86579 242 0.923077 2.23384634 Symbiodiniaceae 252141 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0369   NR OLQ01661.1 2951 g86274 i0 38.2 1.48760330578512 68 31 84.3 1 240 37 382 438 OLQ01661.1 Pentatricopeptide repeat-containing protein, chloroplastic [Symbiodinium microadriaticum] diamond 360 42.7 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium microadriaticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;