RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB82358" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB82358 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27255503 27255503 PRJEB82358_P_NODE_5103_length_415_cov_4.102339_g5092_i0 PRJEB82358 5103 415 4.102339 17.02470685 Gordonia phage SpeedDemon 2759457 Viruses Viruses 47.4 0.00326   NR QNL30547.1 2759457 g5092 i0 29.8 1.23614457831325 124 50 62.9 2 130 390 3 126 QNL30547.1 HNH endonuclease [Gordonia phage SpeedDemon] diamond 513 47.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Bantamvirus Gordonia phage SpeedDemon
28108040 28108040 PRJEB82358_P_NODE_18245_length_243_cov_6.082353_g18234_i0 PRJEB82358 18245 243 6.082353 14.78011779 Thermus phage phiYS4 407392 Viruses Viruses 101 5.35e-23   NR YP_874040.1 407392 g18234 i0 76.7 0.740740740740741 60 14 74.1 0 62 241 1 60 YP_874040.1 DEAD domain helicase [Thermus phage phiYS40] diamond 180 101 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Thermus phage phiYS40

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;