RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB82358" and tax_phylum = "Elusimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Elusimicrobiota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB82358 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2690888 2690888 PRJEB82358_P_NODE_17723_length_246_cov_0.890173_g17712_i0 PRJEB82358 17723 246 0.890173 2.18982558 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 141 1.0199999999999998e-37   NR MFI5345532.1 2030800 g17712 i0 83.1 1.86585365853659 77 13 93.9 0 245 15 126 202 MFI5345532.1 porin [Elusimicrobiota bacterium] diamond 459 141 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
27160456 27160456 PRJEB82358_P_NODE_17722_length_246_cov_0.890173_g17711_i0 PRJEB82358 17722 246 0.890173 2.18982558 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 95.1 1.4e-20   NR MBI3297422.1 2030800 g17711 i0 56.8 0.98780487804878 81 34 98.8 1 245 3 390 469 MBI3297422.1 hypothetical protein [Elusimicrobiota bacterium] diamond 243 95.1 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
28771197 28771197 PRJEB82358_P_NODE_14887_length_264_cov_1.240838_g14876_i0 PRJEB82358 14887 264 1.240838 3.27581232 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 144 2.36e-41   NR MFI5362705.1 2030800 g14876 i0 75.3 2.89772727272727 85 21 96.6 0 255 1 49 133 MFI5362705.1 phosphatase PAP2 family protein [Elusimicrobiota bacterium] diamond 765 144 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30666151 30666151 PRJEB82358_P_NODE_14933_length_263_cov_4.352632_g14922_i0 PRJEB82358 14933 263 4.352632 11.44742216 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 142 2.8e-37   NR MFI5345621.1 2030800 g14922 i0 79.8 0.958174904942966 84 17 95.8 0 3 254 74 157 MFI5345621.1 TonB-dependent receptor [Elusimicrobiota bacterium] diamond 252 142 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;