RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB82358" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJEB82358 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24366605 24366605 PRJEB82358_P_NODE_18600_length_242_cov_1.349112_g18589_i0 PRJEB82358 18600 242 1.349112 3.26485104 Deinococcus aerophilus 522488 Bacteria Bacteria 122 1.08e-33   NR WP_188905152.1 522488 g18589 i0 76.6 1.93388429752066 77 18 95.5 0 10 240 53 129 WP_188905152.1 response regulator [Deinococcus aerophilus] diamond 468 122 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aerophilus
28550417 28550417 PRJEB82358_P_NODE_14127_length_270_cov_1.522843_g14116_i0 PRJEB82358 14127 270 1.522843 4.1116761 Fervidobacterium sp. 1871331 Bacteria Bacteria 72 2.24e-14   NR HUM42171.1 1871331 g14116 i0 50.8 0.677777777777778 61 30 67.8 0 261 79 4 64 HUM42171.1 hypothetical protein [Fervidobacterium sp.] diamond 183 72 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;