RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJEB81463" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB81463 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26939195 26939195 PRJEB81463_P_NODE_26802_length_244_cov_0.912281_g26530_i0 PRJEB81463 26802 244 0.912281 2.22596564 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 155 4.3099999999999997e-47   NR MET0642856.1 2838779 g26530 i0 100 0.995901639344262 81 0 99.6 0 2 244 13 93 MET0642856.1 response regulator [Candidatus Binatia bacterium] diamond 243 155 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27729649 27729649 PRJEB81463_P_NODE_28344_length_242_cov_0.923077_g28072_i0 PRJEB81463 28344 242 0.923077 2.23384634 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 159 3e-46   NR HJU63959.1 2838779 g28072 i0 95 0.991735537190083 80 4 99.2 0 240 1 66 145 HJU63959.1 citrate/2-methylcitrate synthase [Candidatus Binatia bacterium] diamond 240 159 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31456453 31456453 PRJEB81463_P_NODE_14436_length_280_cov_1.410628_g14164_i0 PRJEB81463 14436 280 1.410628 3.9497584 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 195 3.5300000000000005e-58   NR MET0503099.1 2838779 g14164 i0 100 0.996428571428571 93 0 99.6 0 280 2 14 106 MET0503099.1 PAS domain S-box protein [Candidatus Binatia bacterium] diamond 279 195 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32247579 32247579 PRJEB81463_P_NODE_17838_length_263_cov_1.536842_g17566_i0 PRJEB81463 17838 263 1.536842 4.04189446 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 149 1.43e-42   NR HSE85166.1 2838779 g17566 i0 88.4 0.980988593155893 86 10 98.1 0 1 258 45 130 HSE85166.1 ABC transporter permease [Candidatus Binatia bacterium] diamond 258 149 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32525034 32525034 PRJEB81463_P_NODE_27059_length_243_cov_1.829412_g26787_i0 PRJEB81463 27059 243 1.829412 4.44547116 Bacillati 1783272 Bacteria Bacteria 43.1 0.0121   NR HEY1236141.1 2838779 g26787 i0 33.3 3.40740740740741 69 46 85.2 0 27 233 63 131 HEY1236141.1 hypothetical protein [Candidatus Binatia bacterium] diamond 828 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;