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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJEB81327" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB81327 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15442027 15442027 PRJEB81327_P_NODE_12073_length_390_cov_1.050473_g11465_i0 PRJEB81327 12073 390 1.050473 4.0968447 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 209 5.969999999999999e-60   NR MCP9264969.1 6287 g11465 i0 76 34.7615384615385 129 31 99.2 0 1 387 811 939 MCP9264969.1 60S ribosomal protein L10 [Dirofilaria immitis] diamond 13557 209 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
21816360 21816360 PRJEB81327_P_NODE_18118_length_317_cov_3.979508_g17510_i0 PRJEB81327 18118 317 3.979508 12.61504036 Bursaphelenchus 6324 Nematoda Nematoda 120 3.01e-30   NR CAD5208695.1 6326 g17510 i0 49 3.91798107255521 104 53 98.4 0 1 312 218 321 CAD5208695.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 1242 120 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
27666300 27666300 PRJEB81327_P_NODE_40184_length_261_cov_1.420213_g39576_i0 PRJEB81327 40184 261 1.420213 3.70675593 Soboliphyme baturini 241478 Nematoda Nematoda 43.1 0.0106   NR VDO87235.1 241478 g39576 i0 36.4 0.758620689655172 66 40 73.6 2 15 206 27 92 VDO87235.1 unnamed protein product [Soboliphyme baturini] diamond 198 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
28171265 28171265 PRJEB81327_P_NODE_26346_length_285_cov_1.382075_g25738_i0 PRJEB81327 26346 285 1.382075 3.93891375 Mesorhabditis belari 2138241 Nematoda Nematoda 71.2 1.27e-12   NR CAJ0952052.1 2138241 g25738 i0 43.1 0.757894736842105 72 36 75.8 1 59 274 27 93 CAJ0952052.1 unnamed protein product, partial [Mesorhabditis belari] diamond 216 71.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
29465448 29465448 PRJEB81327_P_NODE_14770_length_350_cov_2.021661_g14162_i0 PRJEB81327 14770 350 2.021661 7.0758135 Caenorhabditis remanei 31234 Nematoda Nematoda 51.6 9.67e-5   NR EFO86095.1 31234 g14162 i0 34.6 1.54285714285714 81 48 65.1 2 294 67 371 451 EFO86095.1 hypothetical protein CRE_02109 [Caenorhabditis remanei] diamond 540 51.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
29654882 29654882 PRJEB81327_P_NODE_48170_length_250_cov_0.870056_g47562_i0 PRJEB81327 48170 250 0.870056 2.17514 Auanema sp. JU1783 2878363 Nematoda Nematoda 43.9 0.0146   NR CAI4228983.1 2878363 g47562 i0 34.2 2.58 73 41 87.6 1 224 6 94 159 CAI4228983.1 unnamed protein product [Auanema sp. JU1783] diamond 645 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
29774172 29774172 PRJEB81327_P_NODE_20031_length_310_cov_2.151899_g19423_i0 PRJEB81327 20031 310 2.151899 6.6708869 Metazoa 33208 Nematoda Nematoda 93.2 5.8e-20   NR CDJ94388.1 6289 g19423 i0 46.6 6.65806451612903 103 50 94.8 2 15 308 4 106 CDJ94388.1 Peptidase A1 domain containing protein [Haemonchus contortus] diamond 2064 93.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
29844695 29844695 PRJEB81327_P_NODE_23711_length_290_cov_1.248848_g23103_i0 PRJEB81327 23711 290 1.248848 3.6216592 Oesophagostomum dentatum 61180 Nematoda Nematoda 43.1 0.0446   NR KHJ96381.1 61180 g23103 i0 32.9 0.786206896551724 76 44 75.5 4 284 66 90 161 KHJ96381.1 astacin [Oesophagostomum dentatum] diamond 228 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Oesophagostomum Oesophagostomum dentatum
29876424 29876424 PRJEB81327_P_NODE_41191_length_259_cov_1.655914_g40583_i0 PRJEB81327 41191 259 1.655914 4.28881726 Caenorhabditis elegans 6239 Nematoda Nematoda 60.8 1.87e-8   NR NP_001380015.1 6239 g40583 i0 50.7 0.776061776061776 67 27 77.6 2 1 201 431 491 NP_001380015.1 Pre-mRNA-processing factor 19 [Caenorhabditis elegans] diamond 201 60.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
30216422 30216422 PRJEB81327_P_NODE_38772_length_263_cov_1.621053_g38164_i0 PRJEB81327 38772 263 1.621053 4.26336939 Metazoa 33208 Nematoda Nematoda 173 4.31e-48   NR CAD5216646.1 6326 g38164 i0 94.3 90.3079847908745 87 5 99.2 0 2 262 549 635 CAD5216646.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 23751 174 0.994252873563218 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
31449120 31449120 PRJEB81327_P_NODE_7436_length_516_cov_1.160271_g6832_i0 PRJEB81327 7436 516 1.160271 5.98699836 Metazoa 33208 Nematoda Nematoda 258 9.81e-81   NR WKX97562.1 27835 g6832 i0 76.8 91.6279069767442 168 39 97.7 0 506 3 72 239 WKX97562.1 hypothetical protein Q1695_013322 [Nippostrongylus brasiliensis] diamond 47280 260 0.992307692307692 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Nippostrongylus Nippostrongylus brasiliensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;