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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJEB81327" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 28 ✖

tax_kingdom 1

bioproject 1

  • PRJEB81327 · 28 ✖

analysis 1

  • diamond · 28 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3547706 3547706 PRJEB81327_P_NODE_50903_length_249_cov_0.875000_g50295_i0 PRJEB81327 50903 249 0.875 2.17875 Myxococcaceae bacterium 2484252 Bacteria Bacteria 132 1.97e-34   NR HLT29146.1 2484252 g50295 i0 80.5 12.7349397590361 82 16 98.8 0 247 2 301 382 HLT29146.1 hydroxymethylglutaryl-CoA reductase, degradative [Myxococcaceae bacterium] diamond 3171 132 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
12893694 12893694 PRJEB81327_P_NODE_61911_length_243_cov_0.905882_g61303_i0 PRJEB81327 61911 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 131 2.02e-33   NR WP_153822974.1 889282 g61303 i0 79.7 4.92592592592593 79 16 97.5 0 6 242 31 109 WP_153822974.1 amino acid adenylation domain-containing protein [Polyangium spumosum] diamond 1197 131 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium spumosum
27666306 27666306 PRJEB81327_P_NODE_52784_length_248_cov_0.880000_g52176_i0 PRJEB81327 52784 248 0.88 2.1824 Corallococcus sp. AS-1-12 2874598 Bacteria Bacteria 69.7 1.29e-12   NR WP_223743574.1 2874598 g52176 i0 39.5 0.979838709677419 81 47 98 1 248 6 44 122 WP_223743574.1 hypothetical protein [Corallococcus sp. AS-1-12] diamond 243 69.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus sp. AS-1-12
27698083 27698083 PRJEB81327_P_NODE_51844_length_248_cov_0.880000_g51236_i0 PRJEB81327 51844 248 0.88 2.1824 Labilithrix sp. 1971228 Bacteria Bacteria 73.9 2.41e-14   NR MBX3263321.1 1971228 g51236 i0 51.2 5.93951612903226 82 32 96.8 4 8 247 52 127 MBX3263321.1 hypothetical protein [Labilithrix sp.] diamond 1473 73.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
28044961 28044961 PRJEB81327_P_NODE_41065_length_259_cov_2.096774_g40457_i0 PRJEB81327 41065 259 2.096774 5.43064466 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 144 3.0499999999999993e-40   NR MBS2018161.1 2026735 g40457 i0 91.9 0.996138996138996 86 7 99.6 0 258 1 196 281 MBS2018161.1 NAD(P)-binding domain-containing protein [Deltaproteobacteria bacterium] diamond 258 144 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28108016 28108016 PRJEB81327_P_NODE_56385_length_246_cov_0.890173_g55777_i0 PRJEB81327 56385 246 0.890173 2.18982558 Haliangiales bacterium 3069304 Bacteria Bacteria 63.2 2.49e-9   NR HKA90051.1 3069304 g55777 i0 48.4 0.780487804878049 64 27 72 2 49 225 189 251 HKA90051.1 hypothetical protein [Haliangiales bacterium] diamond 192 63.2 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales     Haliangiales bacterium
28834345 28834345 PRJEB81327_P_NODE_51588_length_248_cov_1.371429_g50980_i0 PRJEB81327 51588 248 1.371429 3.40114392 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 142 1.41e-38   NR MSQ47172.1 2026735 g50980 i0 87.7 0.979838709677419 81 10 98 0 4 246 267 347 MSQ47172.1 type II secretion system protein GspF [Deltaproteobacteria bacterium] diamond 243 142 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28890111 28890111 PRJEB81327_P_NODE_38588_length_263_cov_2.373684_g37980_i0 PRJEB81327 38588 263 2.373684 6.24278892 Bacteria 2 Bacteria Bacteria 109 3.72e-28   NR MBK7951763.1 2026735 g37980 i0 75 1.57414448669202 68 17 77.6 0 1 204 102 169 MBK7951763.1 DUF4019 domain-containing protein [Deltaproteobacteria bacterium] diamond 414 109 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28929116 28929116 PRJEB81327_P_NODE_62328_length_242_cov_1.822485_g61720_i0 PRJEB81327 62328 242 1.822485 4.4104137 Myxococcales bacterium 2026763 Bacteria Bacteria 116 4.35e-30   NR HEY3447903.1 2026763 g61720 i0 73.8 1.97107438016529 80 21 99.2 0 2 241 65 144 HEY3447903.1 hypothetical protein [Myxococcales bacterium] diamond 477 116 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29268894 29268894 PRJEB81327_P_NODE_63429_length_242_cov_0.911243_g62821_i0 PRJEB81327 63429 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 52.4 1.47e-5   NR KYF91466.1 56 g62821 i0 47.1 3.39669421487603 51 26 63.2 1 70 222 349 398 KYF91466.1 hypothetical protein BE17_44695 [Sorangium cellulosum] diamond 822 52.8 0.992424242424242 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
29276265 29276265 PRJEB81327_P_NODE_64789_length_241_cov_0.916667_g64181_i0 PRJEB81327 64789 241 0.916667 2.20916747 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 140 3.2e-37   NR MBN8610625.1 2026735 g64181 i0 91.3 1.99170124481328 80 7 99.6 0 2 241 59 138 MBN8610625.1 protein kinase [Deltaproteobacteria bacterium] diamond 480 140 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29402666 29402666 PRJEB81327_P_NODE_43129_length_256_cov_1.278689_g42521_i0 PRJEB81327 43129 256 1.278689 3.27344384 Chondromyces apiculatus 51 Bacteria Bacteria 105 3.46e-24   NR WP_081865414.1 51 g42521 i0 61 2.90625 82 32 96.1 0 248 3 18 99 WP_081865414.1 phosphoenolpyruvate carboxykinase (GTP) [Chondromyces apiculatus] diamond 744 105 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces apiculatus
29939678 29939678 PRJEB81327_P_NODE_44171_length_254_cov_1.685083_g43563_i0 PRJEB81327 44171 254 1.685083 4.28011082 Sandaracinus sp. 2024858 Bacteria Bacteria 60.1 2.07e-8   NR MFO0683994.1 2024858 g43563 i0 41.9 1.01574803149606 86 44 94.5 2 248 9 76 161 MFO0683994.1 DUF695 domain-containing protein [Sandaracinus sp.] diamond 258 60.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus sp.
30027103 30027103 PRJEB81327_P_NODE_51211_length_248_cov_1.937143_g50603_i0 PRJEB81327 51211 248 1.937143 4.80411464 Myxococcia 32015 Bacteria Bacteria 73.2 4.61e-14   NR MCA9679617.1 2026763 g50603 i0 46.9 3.97983870967742 81 35 94.4 3 235 2 74 149 MCA9679617.1 Fis family transcriptional regulator [Myxococcales bacterium] diamond 987 73.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30539759 30539759 PRJEB81327_P_NODE_39173_length_262_cov_2.439153_g38565_i0 PRJEB81327 39173 262 2.439153 6.39058086 Myxococcales bacterium 2026763 Bacteria Bacteria 152 1.4099999999999999e-40   NR MFT3925664.1 2026763 g38565 i0 83.9 0.99618320610687 87 14 99.6 0 1 261 208 294 MFT3925664.1 AAA family ATPase [Myxococcales bacterium] diamond 261 152 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30666115 30666115 PRJEB81327_P_NODE_29753_length_279_cov_1.145631_g29145_i0 PRJEB81327 29753 279 1.145631 3.19631049 Myxococcales bacterium 2026763 Bacteria Bacteria 45.4 0.00387   NR MCA9507754.1 2026763 g29145 i0 31.8 0.946236559139785 88 44 77.4 3 229 14 28 115 MCA9507754.1 hypothetical protein [Myxococcales bacterium] diamond 264 45.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30697666 30697666 PRJEB81327_P_NODE_36194_length_267_cov_3.608247_g35586_i0 PRJEB81327 36194 267 3.608247 9.63401949 Myxococcales bacterium 2026763 Bacteria Bacteria 179 5.33e-50   NR MCB9541477.1 2026763 g35586 i0 100 0.98876404494382 88 0 98.9 0 2 265 453 540 MCB9541477.1 AAA family ATPase [Myxococcales bacterium] diamond 264 179 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31045668 31045668 PRJEB81327_P_NODE_43415_length_255_cov_2.005495_g42807_i0 PRJEB81327 43415 255 2.005495 5.11401225 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 160 1.3399999999999996e-43   NR MBN8610287.1 2026735 g42807 i0 97.6 0.988235294117647 84 2 98.8 0 254 3 50 133 MBN8610287.1 PAAR domain-containing protein [Deltaproteobacteria bacterium] diamond 252 160 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31108366 31108366 PRJEB81327_P_NODE_62835_length_242_cov_0.911243_g62227_i0 PRJEB81327 62835 242 0.911243 2.20520806 Kofleriaceae bacterium 2212474 Bacteria Bacteria 95.1 1.38e-20   NR MFT3694333.1 2212474 g62227 i0 63.8 0.991735537190083 80 29 99.2 0 1 240 1382 1461 MFT3694333.1 ATP-binding protein [Kofleriaceae bacterium] diamond 240 95.1 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
31266622 31266622 PRJEB81327_P_NODE_63275_length_242_cov_0.911243_g62667_i0 PRJEB81327 63275 242 0.911243 2.20520806 Archangium sp. 1872627 Bacteria Bacteria 42 0.0437   NR MBL8909639.1 1872627 g62667 i0 44.9 0.607438016528926 49 27 60.7 0 148 2 52 100 MBL8909639.1 hypothetical protein [Archangium sp.] diamond 147 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
31298133 31298133 PRJEB81327_P_NODE_38635_length_263_cov_2.184211_g38027_i0 PRJEB81327 38635 263 2.184211 5.74447493 Myxococcaceae bacterium 2484252 Bacteria Bacteria 47.8 7.3e-4   NR GMU59394.1 2484252 g38027 i0 34.5 0.958174904942966 84 46 92.4 2 255 13 170 247 GMU59394.1 MAG: hypothetical protein AMXMBFR34_11570 [Myxococcaceae bacterium] diamond 252 47.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
31393245 31393245 PRJEB81327_P_NODE_23816_length_290_cov_1.059908_g23208_i0 PRJEB81327 23816 290 1.059908 3.0737332 Vitiosangium sp. GDMCC 1.1324 2138576 Bacteria Bacteria 112 2.22e-26   NR WP_108069405.1 2138576 g23208 i0 58.8 1.00344827586207 97 39 99.3 1 290 3 932 1028 WP_108069405.1 translocation/assembly module TamB domain-containing protein [Vitiosangium sp. GDMCC 1.1324] diamond 291 112 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Vitiosangium Vitiosangium sp. GDMCC 1.1324
31962402 31962402 PRJEB81327_P_NODE_31478_length_276_cov_0.916256_g30870_i0 PRJEB81327 31478 276 0.916256 2.52886656 Polyangiaceae bacterium 2268199 Bacteria Bacteria 59.3 7.85e-8   NR HSC87028.1 2268199 g30870 i0 53.9 0.826086956521739 76 35 82.6 0 272 45 91 166 HSC87028.1 hypothetical protein [Polyangiaceae bacterium] diamond 228 59.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32184041 32184041 PRJEB81327_P_NODE_26078_length_285_cov_2.438679_g25470_i0 PRJEB81327 26078 285 2.438679 6.95023515 Labilithrix sp. 1971228 Bacteria Bacteria 173 1.18e-50   NR MDF2693806.1 1971228 g25470 i0 88.2 1.96842105263158 93 11 97.9 0 3 281 183 275 MDF2693806.1 hypothetical protein [Labilithrix sp.] diamond 561 173 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
32500550 32500550 PRJEB81327_P_NODE_24619_length_288_cov_1.432558_g24011_i0 PRJEB81327 24619 288 1.432558 4.12576704 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 65.1 2.05e-10   NR MEO8530726.1 2026735 g24011 i0 55.4 2.6875 56 23 58.3 2 1 168 34 87 MEO8530726.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 774 65.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32500556 32500556 PRJEB81327_P_NODE_46439_length_251_cov_0.865169_g45831_i0 PRJEB81327 46439 251 0.865169 2.17157419 Polyangiaceae bacterium 2268199 Bacteria Bacteria 145 2.23e-38   NR MCU0656837.1 2268199 g45831 i0 88 0.99203187250996006 83 9 99.2 1 2 250 309 390 MCU0656837.1 glutamine amidotransferase [Polyangiaceae bacterium] diamond 249 145 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32657765 32657765 PRJEB81327_P_NODE_25220_length_287_cov_1.439252_g24612_i0 PRJEB81327 25220 287 1.439252 4.13065324 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 161 5.81e-45   NR MBS2015326.1 2026735 g24612 i0 81.1 0.993031358885017 95 18 99.3 0 2 286 196 290 MBS2015326.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 285 161 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32878468 32878468 PRJEB81327_P_NODE_27960_length_282_cov_1.440191_g27352_i0 PRJEB81327 27960 282 1.440191 4.06133862 Labilithrix sp. 1971228 Bacteria Bacteria 97.4 6.229999999999999e-23   NR MBX3189672.1 1971228 g27352 i0 92.6 0.574468085106383 54 4 57.4 0 2 163 143 196 MBX3189672.1 RNA polymerase sigma factor [Labilithrix sp.] diamond 162 97.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;