RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJEB81327" and tax_clade = "Apusozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 21 ✖

bioproject 1

  • PRJEB81327 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2690098 2690098 PRJEB81327_P_NODE_51843_length_248_cov_0.880000_g51235_i0 PRJEB81327 51843 248 0.88 2.1824 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 92.4 3.68e-21   NR XP_013757718.1 461836 g51235 i0 61.7 1.88709677419355 81 31 98 0 3 245 102 182 XP_013757718.1 charged multivesicular body protein 1 [Thecamonas trahens ATCC 50062] diamond 468 92.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
2690322 2690322 PRJEB81327_P_NODE_68403_length_227_cov_2.344156_g67795_i0 PRJEB81327 68403 227 2.344156 5.32123412 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 116 4.41e-31   NR XP_013759013.1 461836 g67795 i0 92.5 0.885462555066079 67 5 88.5 0 226 26 102 168 XP_013759013.1 V-type proton ATPase proteolipid subunit [Thecamonas trahens ATCC 50062] diamond 201 116 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
9066996 9066996 PRJEB81327_P_NODE_25288_length_287_cov_1.345794_g24680_i0 PRJEB81327 25288 287 1.345794 3.86242878 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 145 2.84e-39   NR XP_013759631.1 461836 g24680 i0 71.3 2.94773519163763 94 27 98.3 0 283 2 240 333 XP_013759631.1 adenylosuccinate synthetase [Thecamonas trahens ATCC 50062] diamond 846 145 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
20540527 20540527 PRJEB81327_P_NODE_15657_length_341_cov_1.638060_g15049_i0 PRJEB81327 15657 341 1.63806 5.5857846 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 135 1.19e-36   NR XP_013761636.1 461836 g15049 i0 66.7 0.897360703812317 102 34 89.7 0 339 34 158 259 XP_013761636.1 60S ribosomal protein L8 [Thecamonas trahens ATCC 50062] diamond 306 135 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
21816583 21816583 PRJEB81327_P_NODE_36598_length_267_cov_1.386598_g35990_i0 PRJEB81327 36598 267 1.386598 3.70221666 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 99.4 6.22e-22   NR XP_013758425.1 461836 g35990 i0 79 1.40449438202247 62 13 69.7 0 187 2 1093 1154 XP_013758425.1 condensin complex component SMC3 [Thecamonas trahens ATCC 50062] diamond 375 99.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26622659 26622659 PRJEB81327_P_NODE_24861_length_288_cov_1.111628_g24253_i0 PRJEB81327 24861 288 1.111628 3.20148864 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.2 4.38e-9   NR XP_013762665.1 461836 g24253 i0 41 1.04166666666667 100 55 100 1 288 1 769 868 XP_013762665.1 TPX2 protein [Thecamonas trahens ATCC 50062] diamond 300 63.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26876339 26876339 PRJEB81327_P_NODE_36381_length_267_cov_1.742268_g35773_i0 PRJEB81327 36381 267 1.742268 4.6518555599999996 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 112 3.21e-28   NR XP_013754501.1 461836 g35773 i0 60.9 1.96629213483146 87 34 97.8 0 265 5 113 199 XP_013754501.1 40S ribosomal protein S1 [Thecamonas trahens ATCC 50062] diamond 525 112 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27255465 27255465 PRJEB81327_P_NODE_49843_length_249_cov_0.875000_g49235_i0 PRJEB81327 49843 249 0.875 2.17875 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 99.4 1.7e-24   NR XP_013756220.1 461836 g49235 i0 56.6 1.91566265060241 83 33 96.4 1 8 247 6 88 XP_013756220.1 peptidyl-prolyl cis-trans isomerase [Thecamonas trahens ATCC 50062] diamond 477 99.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27887057 27887057 PRJEB81327_P_NODE_42945_length_256_cov_1.683060_g42337_i0 PRJEB81327 42945 256 1.68306 4.3086336 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 102 3.23e-23   NR XP_013763036.1 461836 g42337 i0 60.2 0.97265625 83 32 96.1 1 255 10 466 548 XP_013763036.1 tripeptidyl peptidase [Thecamonas trahens ATCC 50062] diamond 249 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28202667 28202667 PRJEB81327_P_NODE_34446_length_270_cov_2.208122_g33838_i0 PRJEB81327 34446 270 2.208122 5.9619294 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 101 6.389999999999999e-23   NR XP_013758986.1 461836 g33838 i0 58.1 0.955555555555556 86 36 95.6 0 268 11 386 471 XP_013758986.1 aminotransferase class I and II [Thecamonas trahens ATCC 50062] diamond 258 101 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28329096 28329096 PRJEB81327_P_NODE_48486_length_250_cov_0.870056_g47878_i0 PRJEB81327 48486 250 0.870056 2.17514 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.8 5.38e-5   NR XP_013755362.1 461836 g47878 i0 52.8 1.668 36 17 43.2 0 224 117 207 242 XP_013755362.1 hypothetical protein, variant [Thecamonas trahens ATCC 50062] diamond 417 50.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28802533 28802533 PRJEB81327_P_NODE_49648_length_249_cov_1.579545_g49040_i0 PRJEB81327 49648 249 1.579545 3.93306705 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.1 1.06e-4   NR XP_013762124.1 461836 g49040 i0 44.3 0.734939759036145 61 30 73.5 1 64 246 456 512 XP_013762124.1 uncharacterized protein AMSG_00947 [Thecamonas trahens ATCC 50062] diamond 183 50.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29213498 29213498 PRJEB81327_P_NODE_64749_length_241_cov_0.916667_g64141_i0 PRJEB81327 64749 241 0.916667 2.20916747 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 90.5 4.27e-19   NR XP_013762033.1 461836 g64141 i0 76.2 0.784232365145228 63 15 78.4 0 240 52 45 107 XP_013762033.1 hypothetical protein, variant [Thecamonas trahens ATCC 50062] diamond 189 90.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30192164 30192164 PRJEB81327_P_NODE_48172_length_250_cov_0.870056_g47564_i0 PRJEB81327 48172 250 0.870056 2.17514 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 53.5 4.14e-6   NR XP_013758499.1 461836 g47564 i0 36.3 0.96 80 48 92.4 1 247 17 123 202 XP_013758499.1 uncharacterized protein AMSG_04831 [Thecamonas trahens ATCC 50062] diamond 240 53.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30382256 30382256 PRJEB81327_P_NODE_64433_length_241_cov_1.440476_g63825_i0 PRJEB81327 64433 241 1.440476 3.47154716 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 119 2.7699999999999997e-30   NR XP_013757656.1 461836 g63825 i0 79.7 1.79253112033195 74 15 92.1 0 240 19 296 369 XP_013757656.1 NAD-dependent epimerase/dehydratase [Thecamonas trahens ATCC 50062] diamond 432 119 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30413708 30413708 PRJEB81327_P_NODE_65833_length_240_cov_2.389222_g65225_i0 PRJEB81327 65833 240 2.389222 5.7341328 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 89.4 8.14e-19   NR XP_013756755.1 461836 g65225 i0 60 1.6125 65 24 81.3 1 1 195 325 387 XP_013756755.1 S-adenosylmethionine synthase [Thecamonas trahens ATCC 50062] diamond 387 89.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30697663 30697663 PRJEB81327_P_NODE_30734_length_277_cov_1.357843_g30126_i0 PRJEB81327 30734 277 1.357843 3.76122511 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 60.1 4.31e-8   NR XP_013756167.1 461836 g30126 i0 45.6 0.974729241877256 90 44 92.1 2 2 256 309 398 XP_013756167.1 uncharacterized protein AMSG_12087 [Thecamonas trahens ATCC 50062] diamond 270 60.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31393244 31393244 PRJEB81327_P_NODE_18256_length_316_cov_1.872428_g17648_i0 PRJEB81327 18256 316 1.872428 5.91687248 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 152 8.13e-43   NR XP_013755573.1 461836 g17648 i0 68.3 0.987341772151899 104 32 98.7 1 5 316 44 146 XP_013755573.1 cysteine protease CP19 [Thecamonas trahens ATCC 50062] diamond 312 152 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31614465 31614465 PRJEB81327_P_NODE_53716_length_247_cov_0.885057_g53108_i0 PRJEB81327 53716 247 0.885057 2.18609079 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 67 1.13e-10   NR XP_013756791.1 461836 g53108 i0 43.9 0.801619433198381 66 37 80.2 0 234 37 1054 1119 XP_013756791.1 myosin-I heavy chain class VII unconventional myosin [Thecamonas trahens ATCC 50062] diamond 198 67 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31772578 31772578 PRJEB81327_P_NODE_50837_length_249_cov_0.875000_g50229_i0 PRJEB81327 50837 249 0.875 2.17875 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 126 9.02e-35   NR XP_013754625.1 461836 g50229 i0 69.5 0.987951807228916 82 25 98.8 0 3 248 59 140 XP_013754625.1 vacuolar protein sorting 55 superfamily protein [Thecamonas trahens ATCC 50062] diamond 246 126 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32310803 32310803 PRJEB81327_P_NODE_21119_length_302_cov_1.218341_g20511_i0 PRJEB81327 21119 302 1.218341 3.67938982 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 152 3.65e-45   NR XP_013762927.1 461836 g20511 i0 67 0.993377483443709 100 33 99.3 0 2 301 2 101 XP_013762927.1 actophorin [Thecamonas trahens ATCC 50062] diamond 300 152 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;