RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB81171" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB81171 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27438068 27438068 PRJEB81171_P_NODE_6903_length_264_cov_1.633508_g6776_i0 PRJEB81171 6903 264 1.633508 4.31246112 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 53.9 4.9099999999999996e-06   NR KAA6366645.1 222440 g6776 i0 34.6 1.77272727272727 81 51 92 1 12 254 108 186 KAA6366645.1 MAG: putative AGC family protein kinase, partial [Streblomastix strix] diamond 468 53.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
30445175 30445175 PRJEB81171_P_NODE_3533_length_352_cov_1.677419_g3406_i0 PRJEB81171 3533 352 1.677419 5.90451488 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 62 2.06e-9   NR KAJ4456515.1 342808 g3406 i0 36.7 2.94886363636364 79 48 67.3 1 249 13 19 95 KAJ4456515.1 hypothetical protein PAPYR_8254 [Paratrimastix pyriformis] diamond 1038 62 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
30950723 30950723 PRJEB81171_P_NODE_574_length_861_cov_1.331218_g471_i0 PRJEB81171 574 861 1.331218 11.46178698 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 53.9 4.77e-4   NR KAJ4458064.1 342808 g471 i0 27.1 0.822299651567944 236 130 70.4 10 848 243 417 644 KAJ4458064.1 putative nucleoside phosphatase GDA1/CD39 [Paratrimastix pyriformis] diamond 708 53.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;