RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB81171" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 6 ✖

bioproject 1

  • PRJEB81171 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27438068 27438068 PRJEB81171_P_NODE_6903_length_264_cov_1.633508_g6776_i0 PRJEB81171 6903 264 1.633508 4.31246112 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 53.9 4.9099999999999996e-06   NR KAA6366645.1 222440 g6776 i0 34.6 1.77272727272727 81 51 92 1 12 254 108 186 KAA6366645.1 MAG: putative AGC family protein kinase, partial [Streblomastix strix] diamond 468 53.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
27698068 27698068 PRJEB81171_P_NODE_6924_length_264_cov_1.329843_g6797_i0 PRJEB81171 6924 264 1.329843 3.51078552 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 75.9 1.08e-13   NR KAJ3442867.1 1746091 g6797 i0 45.8 0.943181818181818 83 43 93.2 2 252 7 296 377 KAJ3442867.1 nicastrin [Anaeramoeba flamelloides] diamond 249 75.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
28739655 28739655 PRJEB81171_P_NODE_2427_length_427_cov_1.265537_g2300_i0 PRJEB81171 2427 427 1.265537 5.40384299 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 116 1.31e-30   NR KAJ3430170.1 1746091 g2300 i0 52.7 1.91803278688525 91 43 63.9 0 69 341 28 118 KAJ3430170.1 duf614 family protein-related [Anaeramoeba flamelloides] diamond 819 116 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
30445175 30445175 PRJEB81171_P_NODE_3533_length_352_cov_1.677419_g3406_i0 PRJEB81171 3533 352 1.677419 5.90451488 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 62 2.06e-9   NR KAJ4456515.1 342808 g3406 i0 36.7 2.94886363636364 79 48 67.3 1 249 13 19 95 KAJ4456515.1 hypothetical protein PAPYR_8254 [Paratrimastix pyriformis] diamond 1038 62 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
30824124 30824124 PRJEB81171_P_NODE_9854_length_243_cov_0.864706_g9727_i0 PRJEB81171 9854 243 0.864706 2.10123558 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 68.2 4.25e-11   NR KAJ5068989.1 1746090 g9727 i0 44.4 0.888888888888889 72 39 87.7 1 28 240 791 862 KAJ5068989.1 lrr receptor-like serine/threonine-protein kinase-related [Anaeramoeba ignava] diamond 216 68.2 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
30950723 30950723 PRJEB81171_P_NODE_574_length_861_cov_1.331218_g471_i0 PRJEB81171 574 861 1.331218 11.46178698 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 53.9 4.77e-4   NR KAJ4458064.1 342808 g471 i0 27.1 0.822299651567944 236 130 70.4 10 848 243 417 644 KAJ4458064.1 putative nucleoside phosphatase GDA1/CD39 [Paratrimastix pyriformis] diamond 708 53.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;