RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJEB81171" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 7 ✖

bioproject 1

  • PRJEB81171 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17990881 17990881 PRJEB81171_P_NODE_1615_length_520_cov_1.040268_g1492_i0 PRJEB81171 1615 520 1.040268 5.4093936 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 191 9.789999999999996e-55   NR XP_044566001.1 5763 g1492 i0 57.8 3.99230769230769 173 73 99.8 0 1 519 73 245 XP_044566001.1 uncharacterized protein FDP41_012548 [Naegleria fowleri] diamond 2076 192 0.994791666666667 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28069286 28069286 PRJEB81171_P_NODE_8285_length_250_cov_0.881356_g8158_i0 PRJEB81171 8285 250 0.881356 2.20339 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 121 7.46e-30   NR XP_044548617.1 51637 g8158 i0 65.1 5.976 83 29 99.6 0 2 250 866 948 XP_044548617.1 uncharacterized protein C9374_004905 [Naegleria lovaniensis] diamond 1494 121 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28739656 28739656 PRJEB81171_P_NODE_6187_length_276_cov_1.339901_g6060_i0 PRJEB81171 6187 276 1.339901 3.69812676 Leishmania donovani 5661 Euglenozoa other_Eukaryota 48.1 7.15e-4   NR TPP40392.1 5661 g6060 i0 45.2 0.91304347826087 42 22 44.6 1 254 132 979 1020 TPP40392.1 putative integral membrane protein [Leishmania donovani] diamond 252 48.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
29654867 29654867 PRJEB81171_P_NODE_7110_length_261_cov_1.569149_g6983_i0 PRJEB81171 7110 261 1.569149 4.09547889 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 59.3 6.55e-8   NR XP_044560734.1 5763 g6983 i0 36 3.82758620689655 89 53 97.7 3 6 260 405 493 XP_044560734.1 uncharacterized protein FDP41_004697 [Naegleria fowleri] diamond 999 59.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30697656 30697656 PRJEB81171_P_NODE_6794_length_266_cov_1.590674_g6667_i0 PRJEB81171 6794 266 1.590674 4.23119284 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 58.2 1.87e-7   NR CAG4716594.1 5763 g6667 i0 38.6 0.992481203007519 88 52 97 1 8 265 589 676 CAG4716594.1 unnamed protein product [Naegleria fowleri] diamond 264 58.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31290746 31290746 PRJEB81171_P_NODE_8095_length_251_cov_0.876404_g7968_i0 PRJEB81171 8095 251 0.876404 2.19977404 Naegleria 5761 Heterolobosea other_Eukaryota 62.8 1.72e-9   NR XP_002671304.1 5762 g7968 i0 38.4 4.24302788844621 73 45 87.3 0 29 247 112 184 XP_002671304.1 uncharacterized protein NAEGRDRAFT_73614 [Naegleria gruberi] diamond 1065 63.2 0.993670886075949 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32752573 32752573 PRJEB81171_P_NODE_2800_length_395_cov_0.968944_g2673_i0 PRJEB81171 2800 395 0.968944 3.8273288 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 105 4.01e-24   NR XP_044548436.1 51637 g2673 i0 44.6 2.76455696202532 121 59 91.9 2 20 382 199 311 XP_044548436.1 uncharacterized protein C9374_005337 [Naegleria lovaniensis] diamond 1092 105 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;