RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB80557" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB80557 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30223747 30223747 PRJEB80557_S_NODE_12932_length_258_cov_1.712919_g12536_i0 PRJEB80557 12932 258 1.712919 4.4193310200000004 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62.4 2.11e-10   NR HEY5588847.1 2053589 g12536 i0 38.7 0.872093023255814 75 46 87.2 0 244 20 9 83 HEY5588847.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 225 62.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32878460 32878460 PRJEB80557_S_NODE_6900_length_337_cov_2.013889_g6504_i0 PRJEB80557 6900 337 2.013889 6.78680593 Minisyncoccota bacterium 2053589 Bacteria Bacteria 121 2.4799999999999996e-29   NR MBP9771420.1 2053589 g6504 i0 59.6 0.881305637982196 99 40 88.1 0 319 23 409 507 MBP9771420.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 297 121 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;