RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJEB80557" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJEB80557 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1413645 1413645 PRJEB80557_S_NODE_15262_length_240_cov_1.261780_g14866_i0 PRJEB80557 15262 240 1.26178 3.028272 Pyrinomonas 1562565 Bacteria Bacteria 105 1.67e-25   NR WP_041976015.1 454194 g14866 i0 71 1.725 69 20 86.3 0 1 207 72 140 WP_041976015.1 flagellar motor protein MotB [Pyrinomonas methylaliphatogenes] diamond 414 105 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae Pyrinomonas Pyrinomonas methylaliphatogenes
12892751 12892751 PRJEB80557_S_NODE_8771_length_306_cov_1.408560_g8375_i0 PRJEB80557 8771 306 1.40856 4.3101936 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 124 1.59e-30   NR HVH90456.1 3069120 g8375 i0 85.3 0.666666666666667 68 10 66.7 0 305 102 455 522 HVH90456.1 DNA polymerase [Candidatus Acidiferrum sp.] diamond 204 124 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
15441645 15441645 PRJEB80557_S_NODE_33673_length_168_cov_0.873950_g33277_i0 PRJEB80557 33673 168 0.87395 1.468236 Acidobacteriota bacterium 1978231 Bacteria Bacteria 91.7 2.71e-20   NR MEP7305382.1 1978231 g33277 i0 88.5 2.82142857142857 52 6 92.9 0 156 1 34 85 MEP7305382.1 sodium/proton-translocating pyrophosphatase [Acidobacteriota bacterium] diamond 474 91.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28234188 28234188 PRJEB80557_S_NODE_4146_length_412_cov_2.845730_g3750_i0 PRJEB80557 4146 412 2.84573 11.7244076 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 76.3 5.65e-14   NR MBD0371117.1 2283092 g3750 i0 67.2 0.422330097087379 58 18 41.5 1 80 250 151 208 MBD0371117.1 VWA domain-containing protein [Pyrinomonadaceae bacterium] diamond 174 76.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29087067 29087067 PRJEB80557_S_NODE_25208_length_192_cov_1.083916_g24812_i0 PRJEB80557 25208 192 1.083916 2.08111872 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 90.5 2e-19   NR HVL69247.1 2910147 g24812 i0 71.4 0.984375 63 18 98.4 0 3 191 235 297 HVL69247.1 VWA domain-containing protein [Vicinamibacterales bacterium] diamond 189 90.5 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29939666 29939666 PRJEB80557_S_NODE_26031_length_189_cov_1.392857_g25635_i0 PRJEB80557 26031 189 1.392857 2.63249973 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 59.3 6.3e-9   NR HVH91277.1 3069120 g25635 i0 52.8 0.841269841269841 53 25 84.1 0 162 4 33 85 HVH91277.1 hypothetical protein [Candidatus Acidiferrum sp.] diamond 159 59.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
30595515 30595515 PRJEB80557_S_NODE_28173_length_182_cov_1.533835_g27777_i0 PRJEB80557 28173 182 1.533835 2.7915797 Bacteria 2 Bacteria Bacteria 90.1 3.24e-19   NR MBI2149991.1 1978231 g27777 i0 71.9 3.77472527472527 57 16 94 0 177 7 264 320 MBI2149991.1 methylmalonyl-CoA mutase [Acidobacteriota bacterium] diamond 687 90.5 0.995580110497237 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31867375 31867375 PRJEB80557_S_NODE_32937_length_169_cov_1.741667_g32541_i0 PRJEB80557 32937 169 1.741667 2.94341723 Acidobacteriota bacterium 1978231 Bacteria Bacteria 41.6 0.0365   NR MDT7541686.1 1978231 g32541 i0 45.2 0.745562130177515 42 23 74.6 0 151 26 239 280 MDT7541686.1 hypothetical protein [Acidobacteriota bacterium] diamond 126 41.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;