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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJEB80557" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 9 ✖

bioproject 1

  • PRJEB80557 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7791255 7791255 PRJEB80557_S_NODE_1067_length_758_cov_7.832158_g710_i0 PRJEB80557 1067 758 7.832158 59.36775764 root 1 Root_unresolved Root_unresolved 206 1.9600000000000002e-59   NR WP_048055713.1 2189 g710 i0 63 5.28759894459103 154 57 60.9 0 749 288 375 528 WP_048055713.1 DNA methyltransferase [Methanotorris igneus] diamond 4008 206 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanotorris Methanotorris igneus
28771153 28771153 PRJEB80557_S_NODE_4007_length_418_cov_2.447154_g3611_i0 PRJEB80557 4007 418 2.447154 10.22910372 Archaeoglobaceae archaeon 2511821 Archaea Archaea 75.9 5.85e-13   NR MEM1673093.1 2511821 g3611 i0 69.1 0.789473684210526 55 15 38 2 142 300 375 429 MEM1673093.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 330 75.9 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
28929089 28929089 PRJEB80557_S_NODE_5168_length_379_cov_3.869697_g4772_i0 PRJEB80557 5168 379 3.869697 14.66615163 Archaeoglobaceae archaeon 2511821 Archaea Archaea 89.4 5.88e-18   NR MEM1673093.1 2511821 g4772 i0 72.1 0.965699208443272 61 16 47.5 1 82 261 369 429 MEM1673093.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 366 89.4 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
29055510 29055510 PRJEB80557_S_NODE_7088_length_333_cov_2.475352_g6692_i0 PRJEB80557 7088 333 2.475352 8.2429221600000009 Archaeoglobaceae archaeon 2511821 Archaea Archaea 48.9 5.34e-5   NR MEM1673092.1 2511821 g6692 i0 47.7 0.396396396396396 44 23 39.6 0 331 200 32 75 MEM1673092.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 132 48.9 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
29654855 29654855 PRJEB80557_S_NODE_17070_length_228_cov_1.530726_g16674_i0 PRJEB80557 17070 228 1.530726 3.49005528 Candidatus Methanomethylophilaceae archaeon 2517205 Archaea Archaea 42.4 0.042   NR HKM09363.1 2517205 g16674 i0 39.7 0.828947368421053 63 30 72.4 2 7 171 144 206 HKM09363.1 ABC transporter substrate-binding protein [Candidatus Methanomethylophilaceae archaeon] diamond 189 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae   Candidatus Methanomethylophilaceae archaeon
29749698 29749698 PRJEB80557_S_NODE_30371_length_176_cov_1.015748_g29975_i0 PRJEB80557 30371 176 1.015748 1.78771648 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 45.4 0.0017   NR MCX9024616.1 2032688 g29975 i0 51.6 0.528409090909091 31 15 52.8 0 174 82 571 601 MCX9024616.1 hypothetical protein [Candidatus Methanoperedens sp.] diamond 93 45.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
31702064 31702064 PRJEB80557_S_NODE_29597_length_178_cov_1.209302_g29201_i0 PRJEB80557 29597 178 1.209302 2.15255756 root 1 Root_unresolved Root_unresolved 70.9 1.82e-12   NR MCX9024616.1 2032688 g29201 i0 58.6 1.95505617977528 58 24 97.8 0 176 3 507 564 MCX9024616.1 hypothetical protein [Candidatus Methanoperedens sp.] diamond 348 70.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
32088969 32088969 PRJEB80557_S_NODE_24158_length_195_cov_1.417808_g23762_i0 PRJEB80557 24158 195 1.417808 2.7647256 Thermoplasmatota archaeon 2806419 Archaea Archaea 43.9 0.00757   NR HWH08950.1 2806419 g23762 i0 33.3 0.969230769230769 63 34 84.6 1 20 184 228 290 HWH08950.1 hypothetical protein [Thermoplasmatota archaeon] diamond 189 43.9 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32689437 32689437 PRJEB80557_S_NODE_19300_length_216_cov_1.233533_g18904_i0 PRJEB80557 19300 216 1.233533 2.66443128 Archaeoglobaceae archaeon 2511821 Archaea Archaea 82.8 4.49e-17   NR MEM1673095.1 2511821 g18904 i0 64.7 0.944444444444444 68 23 94.4 1 208 5 139 205 MEM1673095.1 zonular occludens toxin domain-containing protein [Archaeoglobaceae archaeon] diamond 204 82.8 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;