contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJEB80557" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26876328 | 26876328 | PRJEB80557_S_NODE_30661_length_175_cov_1.238095_g30265_i0 | PRJEB80557 | 30661 | 175 | 1.238095 | 2.16666625 | Candidatus Anderseniibacteriota bacterium | 2053502 | Bacteria | Bacteria | 42.4 | 0.021 | NR | HLC49670.1 | 2053502 | g30265 | i0 | 32 | 0.857142857142857 | 50 | 34 | 85.7 | 0 | 151 | 2 | 673 | 722 | HLC49670.1 type I DNA topoisomerase [Candidatus Andersenbacteria bacterium] | diamond | 150 | 42.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Anderseniibacteriota | Candidatus Anderseniibacteriota bacterium | ||||||
| 26932060 | 26932060 | PRJEB80557_S_NODE_12082_length_266_cov_0.926267_g11686_i0 | PRJEB80557 | 12082 | 266 | 0.926267 | 2.46387022 | Bacteria | 2 | Bacteria | Bacteria | 75.9 | 1.07e-13 | NR | HRF28207.1 | 2026720 | g11686 | i0 | 90.7 | 11.6390977443609 | 43 | 4 | 48.5 | 0 | 264 | 136 | 335 | 377 | HRF28207.1 ATP-dependent zinc metalloprotease FtsH [Candidatus Saccharibacteria bacterium] | diamond | 3096 | 75.9 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 26939150 | 26939150 | PRJEB80557_S_NODE_22042_length_203_cov_1.675325_g21646_i0 | PRJEB80557 | 22042 | 203 | 1.675325 | 3.40090975 | Candidatus Caldipriscus sp. | 2831945 | Bacteria | Bacteria | 43.1 | 0.00426 | NR | MCC6012566.1 | 2831945 | g21646 | i0 | 42.2 | 1.33004926108374 | 45 | 25 | 65 | 1 | 4 | 135 | 60 | 104 | MCC6012566.1 co-chaperone GroES [Candidatus Caldipriscus sp.] | diamond | 270 | 43.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Caldipriscota | Candidatus Caldipriscus | Candidatus Caldipriscus sp. | |||||
| 27097401 | 27097401 | PRJEB80557_S_NODE_22702_length_200_cov_2.264901_g22306_i0 | PRJEB80557 | 22702 | 200 | 2.264901 | 4.529802 | Candidatus Elulimicrobium humile | 2802965 | Bacteria | Bacteria | 56.2 | 1.04e-7 | NR | NBP55845.1 | 2802965 | g22306 | i0 | 58.1 | 1.2 | 43 | 18 | 64.5 | 0 | 25 | 153 | 5 | 47 | NBP55845.1 hypothetical protein [Candidatus Elulimicrobium humile] | diamond | 240 | 56.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Elulimicrobiota | Candidatus Elulimicrobia | Candidatus Elulimicrobiales | Candidatus Elulimicrobiaceae | Candidatus Elulimicrobium | Candidatus Elulimicrobium humile | ||
| 27216371 | 27216371 | PRJEB80557_S_NODE_29202_length_179_cov_1.353846_g28806_i0 | PRJEB80557 | 29202 | 179 | 1.353846 | 2.42338434 | Bacteria | 2 | Bacteria | Bacteria | 85.1 | 1.53e-17 | NR | HRH93288.1 | 2053688 | g28806 | i0 | 69 | 4.86033519553073 | 58 | 18 | 97.2 | 0 | 6 | 179 | 298 | 355 | HRH93288.1 M23 family metallopeptidase [Candidatus Peribacteria bacterium] | diamond | 870 | 85.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peribacteria | Candidatus Peribacteria bacterium | |||||
| 27318853 | 27318853 | PRJEB80557_S_NODE_10503_length_283_cov_1.435897_g10107_i0 | PRJEB80557 | 10503 | 283 | 1.435897 | 4.06358851 | Candidatus Saccharimonadaceae bacterium | 2830836 | Bacteria | Bacteria | 151 | 6.16e-42 | NR | MDD3035446.1 | 2830836 | g10107 | i0 | 81.9 | 1.99293286219081 | 94 | 17 | 99.6 | 0 | 283 | 2 | 238 | 331 | MDD3035446.1 cysteine desulfurase NifS [Candidatus Saccharimonadaceae bacterium] | diamond | 564 | 151 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonadaceae bacterium | |||
| 28865881 | 28865881 | PRJEB80557_S_NODE_36608_length_163_cov_0.912281_g36212_i0 | PRJEB80557 | 36608 | 163 | 0.912281 | 1.48701803 | Candidatus Bipolaricaulota bacterium | 2306012 | Bacteria | Bacteria | 60.1 | 8.86e-9 | NR | MFC2081719.1 | 2306012 | g36212 | i0 | 50.9 | 8.74233128834356 | 53 | 26 | 97.5 | 0 | 160 | 2 | 73 | 125 | MFC2081719.1 LacI family DNA-binding transcriptional regulator [Candidatus Bipolaricaulota bacterium] | diamond | 1425 | 60.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Bipolaricaulota | Candidatus Bipolaricaulota bacterium | ||||||
| 29521657 | 29521657 | PRJEB80557_S_NODE_11910_length_267_cov_2.206422_g11514_i0 | PRJEB80557 | 11910 | 267 | 2.206422 | 5.89114674 | Bacteria | 2 | Bacteria | Bacteria | 69.3 | 2.14e-11 | NR | HLB50564.1 | 2052139 | g11514 | i0 | 47.8 | 6.7752808988764 | 67 | 35 | 75.3 | 0 | 253 | 53 | 218 | 284 | HLB50564.1 ATP-binding protein [Patescibacteria group bacterium] | diamond | 1809 | 69.3 | 1 | Bacteria | Bacteria candidate phyla | Patescibacteria group bacterium | |||||||
| 29584539 | 29584539 | PRJEB80557_S_NODE_31350_length_173_cov_1.653226_g30954_i0 | PRJEB80557 | 31350 | 173 | 1.653226 | 2.86008098 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 65.1 | 1.61e-10 | NR | MBI1798522.1 | 2212470 | g30954 | i0 | 68.2 | 11.8092485549133 | 44 | 14 | 76.3 | 0 | 137 | 6 | 123 | 166 | MBI1798522.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Eiseniibacteriota bacterium] | diamond | 2043 | 65.5 | 0.993893129770992 | Bacteria | Bacteria candidate phyla | Candidatus Eiseniibacteriota | Candidatus Eiseniibacteriota bacterium | ||||||
| 30097328 | 30097328 | PRJEB80557_S_NODE_19452_length_215_cov_1.566265_g19056_i0 | PRJEB80557 | 19452 | 215 | 1.566265 | 3.36746975 | Candidatus Saccharibacteria bacterium | 2026720 | Bacteria | Bacteria | 52.4 | 9.52e-6 | NR | TAH35462.1 | 2026720 | g19056 | i0 | 54.3 | 0.641860465116279 | 46 | 21 | 64.2 | 0 | 5 | 142 | 262 | 307 | TAH35462.1 MAG: methionyl-tRNA formyltransferase [Candidatus Saccharibacteria bacterium] | diamond | 138 | 52.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 30223747 | 30223747 | PRJEB80557_S_NODE_12932_length_258_cov_1.712919_g12536_i0 | PRJEB80557 | 12932 | 258 | 1.712919 | 4.4193310200000004 | Minisyncoccota bacterium | 2053589 | Bacteria | Bacteria | 62.4 | 2.11e-10 | NR | HEY5588847.1 | 2053589 | g12536 | i0 | 38.7 | 0.872093023255814 | 75 | 46 | 87.2 | 0 | 244 | 20 | 9 | 83 | HEY5588847.1 hypothetical protein [Candidatus Paceibacterota bacterium] | diamond | 225 | 62.4 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium | ||||||
| 31139713 | 31139713 | PRJEB80557_S_NODE_5515_length_370_cov_1.856698_g5119_i0 | PRJEB80557 | 5515 | 370 | 1.856698 | 6.8697826 | Candidatus Saccharibacteria bacterium 32-5 | 1970481 | Bacteria | Bacteria | 199 | 1.2999999999999999e-58 | NR | OYX53357.1 | 1970481 | g5119 | i0 | 83.3 | 0.972972972972973 | 120 | 20 | 97.3 | 0 | 368 | 9 | 413 | 532 | OYX53357.1 MAG: hypothetical protein B7Y92_03170 [Candidatus Saccharibacteria bacterium 32-50-13] | diamond | 360 | 199 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium 32-50-13 | ||||||
| 31891839 | 31891839 | PRJEB80557_S_NODE_35497_length_165_cov_0.870690_g35101_i0 | PRJEB80557 | 35497 | 165 | 0.87069 | 1.4366385 | Bacteria | 2 | Bacteria | Bacteria | 80.1 | 8.11e-16 | NR | HWR40932.1 | 2052139 | g35101 | i0 | 74.1 | 3.92727272727273 | 54 | 14 | 98.2 | 0 | 163 | 2 | 212 | 265 | HWR40932.1 HAMP domain-containing sensor histidine kinase [Patescibacteria group bacterium] | diamond | 648 | 80.1 | 1 | Bacteria | Bacteria candidate phyla | Patescibacteria group bacterium | |||||||
| 32405492 | 32405492 | PRJEB80557_S_NODE_11859_length_268_cov_1.278539_g11463_i0 | PRJEB80557 | 11859 | 268 | 1.278539 | 3.42648452 | Candidatus Chazhemtobacterium aquaticus | 2715735 | Bacteria | Bacteria | 58.2 | 1.96e-7 | NR | WP_161931994.1 | 2715735 | g11463 | i0 | 38.8 | 0.895522388059702 | 80 | 43 | 82.8 | 2 | 17 | 238 | 765 | 844 | WP_161931994.1 DNA polymerase III subunit alpha [Candidatus Chazhemtobacterium aquaticus] | diamond | 240 | 58.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Chazhemtobacteraceae | Candidatus Chazhemtobacterium | Candidatus Chazhemtobacterium aquaticus | |||||
| 32878460 | 32878460 | PRJEB80557_S_NODE_6900_length_337_cov_2.013889_g6504_i0 | PRJEB80557 | 6900 | 337 | 2.013889 | 6.78680593 | Minisyncoccota bacterium | 2053589 | Bacteria | Bacteria | 121 | 2.4799999999999996e-29 | NR | MBP9771420.1 | 2053589 | g6504 | i0 | 59.6 | 0.881305637982196 | 99 | 40 | 88.1 | 0 | 319 | 23 | 409 | 507 | MBP9771420.1 hypothetical protein [Candidatus Paceibacterota bacterium] | diamond | 297 | 121 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;