RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB7799" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7799 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32913352 32913352 PRJEB7799l_S_NODE_7745_length_185_cov_1.626667_g7716_i0 PRJEB7799 7745 185 1.626667 3.00933395 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 62.4 3.59e-10   NR MEY2493788.1 2026799 g7716 i0 50.8 1.88108108108108 59 29 95.7 0 185 9 62 120 MEY2493788.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 348 62.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
33050166 33050166 PRJEB7799n_S_NODE_3637_length_237_cov_2.440594_g3600_i0 PRJEB7799 3637 237 2.440594 5.78420778 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 99.8 4.939999999999999e-23   NR MBI5770155.1 2026799 g3600 i0 69.1 1.72151898734177 68 21 86.1 0 235 32 168 235 MBI5770155.1 glycosyltransferase [Verrucomicrobiota bacterium] diamond 408 99.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;