RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB7799" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB7799 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25617368 25617368 PRJEB7799p_S_NODE_2065_length_316_cov_76.608541_g2042_i0 PRJEB7799 2065 316 76.608541 242.08298956 Mycoplasmoidaceae bacterium 2854035 Bacteria Bacteria 63.5 8.45e-10   NR GMO17728.1 2854035 g2042 i0 55.2 1.17721518987342 58 26 55.1 0 314 141 119 176 GMO17728.1 MAG: hypothetical protein Ta2E_08820 [Mycoplasmoidaceae bacterium] diamond 372 63.5 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Mycoplasmoidaceae   Mycoplasmoidaceae bacterium
33066411 33066411 PRJEB7799a_S_NODE_1941_length_307_cov_2.518382_g1906_i0 PRJEB7799 1941 307 2.518382 7.73143274 Mycoplasmatales bacterium 2023991 Bacteria Bacteria 132 3e-37   NR HXN54586.1 2023991 g1906 i0 70.1 0.850162866449511 87 26 85 0 301 41 39 125 HXN54586.1 30S ribosomal protein S12 [Mycoplasmatales bacterium] diamond 261 132 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales     Mycoplasmatales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;