RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB7799" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB7799 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32913609 32913609 PRJEB7799o_S_NODE_5009_length_151_cov_1.241379_g5001_i0 PRJEB7799 5009 151 1.241379 1.87448229 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 74.7 6.4e-16   NR XP_004352812.1 1257118 g5001 i0 78.6 6.6158940397351 42 9 83.4 0 151 26 50 91 XP_004352812.1 ribosomal L37ae protein family [Acanthamoeba castellanii str. Neff] diamond 999 74.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33042879 33042879 PRJEB7799p_S_NODE_4924_length_235_cov_2.485000_g4901_i0 PRJEB7799 4924 235 2.485 5.83975 Acanthamoeba 5754 Discosea other_Eukaryota 47.4 7.44e-4   NR ABY63400.1 65661 g4901 i0 42.4 1.5063829787234 59 33 75.3 1 3 179 352 409 ABY63400.1 encystation-mediating serine proteinase [Acanthamoeba healyi] diamond 354 47.8 0.99163179916318 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba healyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;