RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB7799" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB7799 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32913777 32913777 PRJEB7799p_S_NODE_4305_length_245_cov_558.147619_g4282_i0 PRJEB7799 4305 245 558.147619 1367.46166655 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 58.9 3.45e-8   NR UVC54537.1 68886 g4282 i0 58 0.612244897959184 50 21 61.2 0 244 95 166 215 UVC54537.1 60S ribosomal L1/L10a protein [Theileria orientalis] diamond 150 58.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
32974784 32974784 PRJEB7799p_S_NODE_5418_length_228_cov_2.378238_g5395_i0 PRJEB7799 5418 228 2.378238 5.42238264 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 72.4 2.12e-14   NR XP_013229778.1 5802 g5395 i0 66.1 3.11842105263158 59 20 77.6 0 225 49 41 99 XP_013229778.1 ribosomal protein L41, putative [Eimeria tenella] diamond 711 72.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;