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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJEB76780" and tax_phylum = "Actinomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 25 ✖

tax_kingdom 1

bioproject 1

  • PRJEB76780 · 25 ✖

analysis 1

  • diamond · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
138765 138765 PRJEB76780_P_NODE_7781_length_290_cov_1.009217_g7681_i0 PRJEB76780 7781 290 1.009217 2.9267293 Actinomycetota bacterium 2900548 Bacteria Bacteria 90.9 7.39e-19   NR MBA3380768.1 2900548 g7681 i0 54.7 0.982758620689655 95 43 98.3 0 5 289 379 473 MBA3380768.1 serine/threonine protein kinase [Actinomycetota bacterium] diamond 285 90.9 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
996410 996410 PRJEB76780_P_NODE_13441_length_242_cov_0.923077_g13341_i0 PRJEB76780 13441 242 0.923077 2.23384634 Candidatus Brevibacterium intestinigallinarum 2838516 Bacteria Bacteria 156 6.8700000000000015e-44   NR HJA37896.1 2838516 g13341 i0 87.5 0.991735537190083 80 10 99.2 0 3 242 258 337 HJA37896.1 M1 family metallopeptidase [Candidatus Brevibacterium intestinigallinarum] diamond 240 156 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Brevibacteriaceae Brevibacterium Candidatus Brevibacterium intestinigallinarum
5241330 5241330 PRJEB76780_P_NODE_12805_length_244_cov_0.912281_g12705_i0 PRJEB76780 12805 244 0.912281 2.22596564 Blastococcus sp. CT_GayMR19 2559608 Bacteria Bacteria 138 1.06e-36   NR WP_348633826.1 2559608 g12705 i0 87.7 0.995901639344262 81 10 99.6 0 243 1 17 97 WP_348633826.1 TrkH family potassium uptake protein [Blastococcus sp. CT_GayMR19] diamond 243 138 1 Bacteria   Bacillati Actinomycetota Actinomycetes Geodermatophilales Geodermatophilaceae Blastococcus Blastococcus sp. CT_GayMR19
7373956 7373956 PRJEB76780_P_NODE_8566_length_277_cov_1.318627_g8466_i0 PRJEB76780 8566 277 1.318627 3.65259679 Acidimicrobiales bacterium 2201156 Bacteria Bacteria 177 1.67e-51   NR HET9601393.1 2201156 g8466 i0 98.9 0.996389891696751 92 1 99.6 0 277 2 223 314 HET9601393.1 glycogen/starch synthase [Acidimicrobiales bacterium] diamond 276 177 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales     Acidimicrobiales bacterium
16715486 16715486 PRJEB76780_P_NODE_494_length_1124_cov_1.752617_g438_i0 PRJEB76780 494 1124 1.752617 19.69941508 Acidimicrobiia bacterium 2080302 Bacteria Bacteria 288 1.84e-89   NR MBK5222091.1 2080302 g438 i0 42 0.979537366548043 367 202 95.8 2 2 1078 115 478 MBK5222091.1 MFS transporter [Acidimicrobiia bacterium] diamond 1101 288 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia       Acidimicrobiia bacterium
23090663 23090663 PRJEB76780_P_NODE_10999_length_251_cov_0.876404_g10899_i0 PRJEB76780 10999 251 0.876404 2.19977404 Brachybacterium sp. HMSC 1891286 Bacteria Bacteria 144 2.2199999999999998e-39   NR WP_141748205.1 1581127 g10899 i0 85.5 0.99203187250996006 83 12 99.2 0 3 251 307 389 WP_141748205.1 hypothetical protein, partial [Brachybacterium sp. HMSC06H03] diamond 249 144 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Dermabacteraceae Brachybacterium Brachybacterium sp. HMSC06H03
26876309 26876309 PRJEB76780_P_NODE_12441_length_245_cov_0.906977_g12341_i0 PRJEB76780 12441 245 0.906977 2.22209365 Dermatophilaceae bacterium 2728912 Bacteria Bacteria 88.2 5.7e-19   NR HZW45582.1 2728912 g12341 i0 57 3.72244897959184 79 34 96.7 0 4 240 108 186 HZW45582.1 SGNH/GDSL hydrolase family protein [Dermatophilaceae bacterium] diamond 912 88.2 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Dermatophilaceae   Dermatophilaceae bacterium
27413760 27413760 PRJEB76780_P_NODE_1423_length_694_cov_1.660225_g1329_i0 PRJEB76780 1423 694 1.660225 11.5219615 Conexibacter sp. 1929289 Bacteria Bacteria 48.5 0.0157   NR MCW2954729.1 1929289 g1329 i0 29.3 2.68443804034582 164 93 67 6 687 223 200 349 MCW2954729.1 conserved repeat domain protein [Conexibacter sp.] diamond 1863 48.5 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Conexibacteraceae Conexibacter Conexibacter sp.
27729605 27729605 PRJEB76780_P_NODE_1804_length_619_cov_1.571429_g1707_i0 PRJEB76780 1804 619 1.571429 9.72714551 Acidimicrobiales bacterium 2201156 Bacteria Bacteria 77.4 5.63e-13   NR HEX5947907.1 2201156 g1707 i0 31.8 5.80613893376414 198 121 92.6 8 23 595 113 303 HEX5947907.1 hypothetical protein [Acidimicrobiales bacterium] diamond 3594 77.4 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales     Acidimicrobiales bacterium
27824122 27824122 PRJEB76780_P_NODE_6284_length_322_cov_1.433735_g6184_i0 PRJEB76780 6284 322 1.433735 4.6166267 Rhodococcus sp. G-MC3 3046209 Bacteria Bacteria 58.9 1.54e-7   NR WP_283511579.1 3046209 g6184 i0 30.8 2.89751552795031 107 64 99.7 2 322 2 46 142 WP_283511579.1 NAD-dependent epimerase/dehydratase family protein [Rhodococcus sp. G-MC3] diamond 933 58.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Nocardiaceae Rhodococcus Rhodococcus sp. G-MC3
28107982 28107982 PRJEB76780_P_NODE_8565_length_277_cov_1.333333_g8465_i0 PRJEB76780 8565 277 1.333333 3.69333241 Streptomyces sp. NPDC 1931 Bacteria Bacteria 63.9 2.02e-9   NR WP_358822004.1 3155349 g8465 i0 62.1 2.4043321299639002 66 23 69.3 1 86 277 421 486 WP_358822004.1 SGNH/GDSL hydrolase family protein [Streptomyces sp. NPDC006173] diamond 666 63.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. NPDC006173
28581899 28581899 PRJEB76780_P_NODE_13467_length_241_cov_2.577381_g13367_i0 PRJEB76780 13467 241 2.577381 6.21148821 Solirubrobacteraceae bacterium 2586742 Bacteria Bacteria 118 1.02e-31   NR HWT25480.1 2586742 g13367 i0 75.9 2.97510373443983 79 19 98.3 0 237 1 22 100 HWT25480.1 bifunctional phosphoglucose/phosphomannose isomerase [Solirubrobacteraceae bacterium] diamond 717 118 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Solirubrobacteraceae   Solirubrobacteraceae bacterium
29024160 29024160 PRJEB76780_P_NODE_12568_length_245_cov_0.906977_g12468_i0 PRJEB76780 12568 245 0.906977 2.22209365 Actinomycetota bacterium 2900548 Bacteria Bacteria 73.9 3.07e-13   NR MCA1836587.1 2900548 g12468 i0 54.7 1.70204081632653 64 29 78.4 0 17 208 23 86 MCA1836587.1 multicopper oxidase domain-containing protein [Actinomycetota bacterium] diamond 417 73.9 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
29395411 29395411 PRJEB76780_P_NODE_3669_length_426_cov_1.325779_g3569_i0 PRJEB76780 3669 426 1.325779 5.64781854 Actinomycetes 1760 Bacteria Bacteria 130 8.239999999999998e-35   NR GDY55159.1 68280 g3569 i0 56.3 10.7535211267606 103 45 72.5 0 117 425 49 151 GDY55159.1 hypothetical protein SVIO_057820 [Streptomyces violaceusniger] diamond 4581 131 0.99236641221374 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces violaceusniger
29433922 29433922 PRJEB76780_P_NODE_13030_length_243_cov_0.917647_g12930_i0 PRJEB76780 13030 243 0.917647 2.22988221 Actinomycetota bacterium 2900548 Bacteria Bacteria 98.6 7.82e-22   NR MDQ1287883.1 2900548 g12930 i0 57.5 3.64197530864198 73 31 90.1 0 6 224 460 532 MDQ1287883.1 hypothetical protein [Actinomycetota bacterium] diamond 885 98.6 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
30002823 30002823 PRJEB76780_P_NODE_8451_length_279_cov_1.135922_g8351_i0 PRJEB76780 8451 279 1.135922 3.16922238 Kocuria marina 223184 Bacteria Bacteria 181 5.98e-57   NR WP_145008130.1 223184 g8351 i0 100 1 93 0 100 0 279 1 17 109 WP_145008130.1 hypothetical protein [Kocuria marina] diamond 279 181 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Kocuria Kocuria marina
30223736 30223736 PRJEB76780_P_NODE_13152_length_243_cov_0.917647_g13052_i0 PRJEB76780 13152 243 0.917647 2.22988221 Lawsonella clevelandensis 1528099 Bacteria Bacteria 161 8.459999999999999e-47   NR PZP89146.1 1528099 g13052 i0 100 1 81 0 100 0 243 1 74 154 PZP89146.1 MAG: hypothetical protein DI579_04450 [Lawsonella clevelandensis] diamond 243 161 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Lawsonellaceae Lawsonella Lawsonella clevelandensis
30476744 30476744 PRJEB76780_P_NODE_8213_length_283_cov_1.000000_g8113_i0 PRJEB76780 8213 283 1 2.83 Micromonospora echinaurantiaca 47857 Bacteria Bacteria 45.8 0.00493   NR WP_088993160.1 47857 g8113 i0 34.7 0.795053003533569 75 49 79.5 0 57 281 698 772 WP_088993160.1 BTAD domain-containing putative transcriptional regulator [Micromonospora echinaurantiaca] diamond 225 45.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae Micromonospora Micromonospora echinaurantiaca
30602830 30602830 PRJEB76780_P_NODE_13253_length_242_cov_0.923077_g13153_i0 PRJEB76780 13253 242 0.923077 2.23384634 Ornithinibacter sp. 2862748 Bacteria Bacteria 132 1.21e-34   NR HYN66500.1 2862748 g13153 i0 88.8 0.991735537190083 80 9 99.2 0 2 241 133 212 HYN66500.1 ABC transporter permease [Ornithinibacter sp.] diamond 240 132 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Intrasporangiaceae Ornithinibacter Ornithinibacter sp.
30761034 30761034 PRJEB76780_P_NODE_9534_length_263_cov_1.231579_g9434_i0 PRJEB76780 9534 263 1.231579 3.23905277 Actinomycetota bacterium 2900548 Bacteria Bacteria 70.9 5.63e-12   NR NCG35923.1 2900548 g9434 i0 48.7 1.75665399239544 76 12 86.7 2 1 228 286 334 NCG35923.1 iron-containing alcohol dehydrogenase [Actinomycetota bacterium] diamond 462 70.9 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
30792485 30792485 PRJEB76780_P_NODE_12874_length_244_cov_0.912281_g12774_i0 PRJEB76780 12874 244 0.912281 2.22596564 Microbacterium sp. BR1 1070896 Bacteria Bacteria 139 3.4899999999999995e-37   NR WP_157813898.1 1070896 g12774 i0 86.4 0.995901639344262 81 11 99.6 0 244 2 192 272 WP_157813898.1 hypothetical protein [Microbacterium sp. BR1] diamond 243 139 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp. BR1
31234749 31234749 PRJEB76780_P_NODE_7115_length_303_cov_1.117391_g7015_i0 PRJEB76780 7115 303 1.117391 3.38569473 Actinomycetes bacterium 1883427 Bacteria Bacteria 129 9e-33   NR MCH9718370.1 1883427 g7015 i0 56 3.96039603960396 100 44 99 0 300 1 378 477 MCH9718370.1 alpha/beta hydrolase [Actinomycetes bacterium] diamond 1200 129 1 Bacteria   Bacillati Actinomycetota Actinomycetes       Actinomycetes bacterium
32088953 32088953 PRJEB76780_P_NODE_13038_length_243_cov_0.917647_g12938_i0 PRJEB76780 13038 243 0.917647 2.22988221 Actinomycetota bacterium 2900548 Bacteria Bacteria 56.6 4.55e-8   NR MBA2752014.1 2900548 g12938 i0 58 0.617283950617284 50 20 61.7 1 182 33 6 54 MBA2752014.1 protease inhibitor I42 family protein [Actinomycetota bacterium] diamond 150 56.6 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
32120764 32120764 PRJEB76780_P_NODE_11598_length_248_cov_0.891429_g11498_i0 PRJEB76780 11598 248 0.891429 2.21074392 Candidatus Nanopelagicus abundans 1884916 Bacteria Bacteria 56.6 4.16e-7   NR WP_095688594.1 1884916 g11498 i0 61.4 0.532258064516129 44 17 53.2 0 109 240 1 44 WP_095688594.1 dTDP-4-dehydrorhamnose reductase [Candidatus Nanopelagicus abundans] diamond 132 56.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Candidatus Nanopelagicales Candidatus Nanopelagicaceae Candidatus Nanopelagicus Candidatus Nanopelagicus abundans
32689432 32689432 PRJEB76780_P_NODE_9800_length_259_cov_1.677419_g9700_i0 PRJEB76780 9800 259 1.677419 4.34451521 Actinomycetota bacterium 2900548 Bacteria Bacteria 41.6 0.0243   NR MCA1845286.1 2900548 g9700 i0 71.4 0.324324324324324 28 8 32.4 0 2 85 6 33 MCA1845286.1 VWA domain-containing protein [Actinomycetota bacterium] diamond 84 41.6 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;