RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB76780" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJEB76780 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27571346 27571346 PRJEB76780_P_NODE_7344_length_298_cov_1.368889_g7244_i0 PRJEB76780 7344 298 1.368889 4.07928922 Nitrosopumilus sp. 2024843 Archaea Archaea 42.4 0.0459   NR WP_368058175.1 2024843 g7244 i0 27.5 0.694630872483222 69 50 69.5 0 297 91 34 102 WP_368058175.1 Lrp/AsnC family transcriptional regulator [Nitrosopumilus sp.] diamond 207 42.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
30065723 30065723 PRJEB76780_P_NODE_392_length_1230_cov_1.884183_g344_i0 PRJEB76780 392 1230 1.884183 23.1754509 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 59.3 2.22e-5   NR MCX6655225.1 2026714 g344 i0 38.7 0.258536585365854 106 55 25.1 6 1175 867 565 663 MCX6655225.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Bathyarchaeota archaeon] diamond 318 59.3 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32088954 32088954 PRJEB76780_P_NODE_13318_length_242_cov_0.923077_g13218_i0 PRJEB76780 13318 242 0.923077 2.23384634 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 99.4 3.0200000000000002e-22   NR RLI02757.1 2026714 g13218 i0 55 1.98347107438017 80 36 99.2 0 1 240 57 136 RLI02757.1 MAG: hypothetical protein DRO30_02100 [Candidatus Bathyarchaeota archaeon] diamond 480 99.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;