RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJEB76780" and tax_clade = "Stenosarchaea group"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 23 ✖

bioproject 1

  • PRJEB76780 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6516965 6516965 PRJEB76780_P_NODE_9466_length_264_cov_1.376963_g9366_i0 PRJEB76780 9466 264 1.376963 3.63518232 Natronomonas sp. LN261 2750669 Archaea Archaea 172 1.88e-50   NR WP_181692297.1 2750669 g9366 i0 95.4 1.97727272727273 87 4 98.9 0 263 3 104 190 WP_181692297.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG [Natronomonas sp. LN261] diamond 522 172 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp. LN261
15441189 15441189 PRJEB76780_P_NODE_12293_length_246_cov_0.901734_g12193_i0 PRJEB76780 12293 246 0.901734 2.21826564 Halodesulfurarchaeum sp. 1980530 Archaea Archaea 110 2.63e-26   NR MFB6086179.1 1980530 g12193 i0 65.4 2.96341463414634 81 28 98.8 0 3 245 414 494 MFB6086179.1 cobyric acid synthase [Halodesulfurarchaeum sp.] diamond 729 110 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halodesulfurarchaeum Halodesulfurarchaeum sp.
23090675 23090675 PRJEB76780_P_NODE_12459_length_245_cov_0.906977_g12359_i0 PRJEB76780 12459 245 0.906977 2.22209365 Natronomonas sp. LN261 2750669 Archaea Archaea 159 5.229999999999998e-43   NR WP_181691439.1 2750669 g12359 i0 96.3 0.991836734693878 81 3 99.2 0 2 244 141 221 WP_181691439.1 DNA mismatch repair protein MutS [Natronomonas sp. LN261] diamond 243 159 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp. LN261
26622629 26622629 PRJEB76780_P_NODE_11761_length_248_cov_0.891429_g11661_i0 PRJEB76780 11761 248 0.891429 2.21074392 Haloferacaceae archaeon 2080321 Archaea Archaea 141 2.1199999999999996e-37   NR MFB6160220.1 2080321 g11661 i0 86.4 0.979838709677419 81 11 98 0 248 6 83 163 MFB6160220.1 rhodanese-like domain-containing protein [Haloferacaceae archaeon] diamond 243 141 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae   Haloferacaceae archaeon
26773812 26773812 PRJEB76780_P_NODE_8061_length_285_cov_1.471698_g7961_i0 PRJEB76780 8061 285 1.471698 4.1943393 Methanobacteriati 3366610 Archaea Archaea 90.5 6.93e-19   NR OFV67421.1 1838285 g7961 i0 52 1.57894736842105 75 35 78.9 1 285 61 91 164 OFV67421.1 MAG: ATPase [Candidatus Syntrophoarchaeum caldarius] diamond 450 91.3 0.991237677984666 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales   Candidatus Syntropharchaeum Candidatus Syntropharchaeum caldarium
26781153 26781153 PRJEB76780_P_NODE_11661_length_248_cov_0.891429_g11561_i0 PRJEB76780 11661 248 0.891429 2.21074392 Haloarcula sp. K1 1622207 Archaea Archaea 157 1.6799999999999994e-42   NR WP_064289137.1 1622207 g11561 i0 93.9 0.991935483870968 82 5 99.2 0 246 1 370 451 WP_064289137.1 ATP-dependent DNA helicase [Haloarcula sp. K1] diamond 246 157 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula sp. K1
26876317 26876317 PRJEB76780_P_NODE_8421_length_279_cov_1.514563_g8321_i0 PRJEB76780 8421 279 1.514563 4.22563077 Natronomonas sp. LN261 2750669 Archaea Archaea 121 6.079999999999999e-31   NR WP_181691015.1 2750669 g8321 i0 93.1 0.774193548387097 72 3 77.4 1 216 1 1 70 WP_181691015.1 S1C family serine protease [Natronomonas sp. LN261] diamond 216 121 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp. LN261
27097377 27097377 PRJEB76780_P_NODE_11342_length_249_cov_0.886364_g11242_i0 PRJEB76780 11342 249 0.886364 2.20704636 Halosimplex pelagicum 869886 Archaea Archaea 94.4 2.25e-20   NR WP_179922740.1 869886 g11242 i0 59.8 0.987951807228916 82 32 98.8 1 247 2 167 247 WP_179922740.1 acyl-CoA/acyl-ACP dehydrogenase [Halosimplex pelagicum] diamond 246 94.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex pelagicum
28076448 28076448 PRJEB76780_P_NODE_13405_length_242_cov_0.923077_g13305_i0 PRJEB76780 13405 242 0.923077 2.23384634 Natronomonas sp. LN261 2750669 Archaea Archaea 161 4.43e-49   NR WP_370464959.1 2750669 g13305 i0 97.5 2.97520661157025 80 2 99.2 0 241 2 43 122 WP_370464959.1 PH domain-containing protein [Natronomonas sp. LN261] diamond 720 161 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp. LN261
28107971 28107971 PRJEB76780_P_NODE_11405_length_249_cov_0.886364_g11305_i0 PRJEB76780 11405 249 0.886364 2.20704636 Halodesulfurarchaeum sp. HSR-GB 3074077 Archaea Archaea 112 1.32e-26   NR WP_310553595.1 3074077 g11305 i0 62.5 0.963855421686747 80 30 96.4 0 1 240 31 110 WP_310553595.1 histidine kinase N-terminal 7TM domain-containing protein [Halodesulfurarchaeum sp. HSR-GB] diamond 240 112 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halodesulfurarchaeum Halodesulfurarchaeum sp. HSR-GB
28202632 28202632 PRJEB76780_P_NODE_12546_length_245_cov_0.906977_g12446_i0 PRJEB76780 12546 245 0.906977 2.22209365 Halorubrum laminariae 1433523 Archaea Archaea 61.6 8.1e-9   NR WP_256418948.1 1433523 g12446 i0 96.7 0.36734693877551 30 1 36.7 0 90 1 1 30 WP_256418948.1 Cdc6/Cdc18 family protein [Halorubrum laminariae] diamond 90 61.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum laminariae
28234162 28234162 PRJEB76780_P_NODE_12786_length_244_cov_0.912281_g12686_i0 PRJEB76780 12786 244 0.912281 2.22596564 Halobacterium yunchengense 3108497 Archaea Archaea 92.8 4.59e-21   NR WP_336035552.1 3108497 g12686 i0 66.7 1.52459016393443 63 21 77.5 0 1 189 164 226 WP_336035552.1 HD domain-containing protein [Halobacterium yunchengense] diamond 372 92.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium yunchengense
28960889 28960889 PRJEB76780_P_NODE_10968_length_251_cov_0.876404_g10868_i0 PRJEB76780 10968 251 0.876404 2.19977404 Halorubrum trueperi 2004704 Archaea Archaea 123 3.77e-31   NR WP_379766111.1 2004704 g10868 i0 75.6 1.9601593625498 82 20 98 0 247 2 11 92 WP_379766111.1 hypothetical protein [Halorubrum trueperi] diamond 492 123 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum trueperi
29244819 29244819 PRJEB76780_P_NODE_11869_length_247_cov_0.896552_g11769_i0 PRJEB76780 11869 247 0.896552 2.21448344 Halodesulfurarchaeum sp. 1980530 Archaea Archaea 66.2 1.15e-10   NR WP_332320319.1 1980530 g11769 i0 61.7 0.57085020242915 47 18 57.1 0 245 105 229 275 WP_332320319.1 DUF1109 domain-containing protein [Halodesulfurarchaeum sp.] diamond 141 66.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halodesulfurarchaeum Halodesulfurarchaeum sp.
29339618 29339618 PRJEB76780_P_NODE_12209_length_246_cov_0.901734_g12109_i0 PRJEB76780 12209 246 0.901734 2.21826564 Halorientalis sp. 1931229 Archaea Archaea 89 1.28e-19   NR MFB6143051.1 1931229 g12109 i0 54.3 1.97560975609756 81 37 98.8 0 3 245 57 137 MFB6143051.1 helix-turn-helix domain-containing protein [Halorientalis sp.] diamond 486 89 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halorientalis Halorientalis sp.
29939652 29939652 PRJEB76780_P_NODE_8411_length_279_cov_1.514563_g8311_i0 PRJEB76780 8411 279 1.514563 4.22563077 Halodesulfurarchaeum sp. HSR-GB 3074077 Archaea Archaea 103 2.3499999999999994e-23   NR WP_310554221.1 3074077 g8311 i0 53.8 0.978494623655914 91 41 97.8 1 274 2 89 178 WP_310554221.1 DEAD/DEAH box helicase [Halodesulfurarchaeum sp. HSR-GB] diamond 273 103 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halodesulfurarchaeum Halodesulfurarchaeum sp. HSR-GB
31013657 31013657 PRJEB76780_P_NODE_12535_length_245_cov_0.906977_g12435_i0 PRJEB76780 12535 245 0.906977 2.22209365 Haloarcula sebkhae 932660 Archaea Archaea 59.3 5.33e-8   NR WP_188979057.1 932660 g12435 i0 55.2 0.710204081632653 58 26 71 0 216 43 1 58 WP_188979057.1 hypothetical protein [Haloarcula sebkhae] diamond 174 59.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula sebkhae
32247545 32247545 PRJEB76780_P_NODE_9098_length_269_cov_1.418367_g8998_i0 PRJEB76780 9098 269 1.418367 3.81540723 unclassified Halalkaliarchaeum 2678344 Archaea Archaea 179 1.34e-53   NR WP_259534103.1 2678344 g8998 i0 96.6 0.992565055762082 89 3 99.3 0 1 267 122 210 WP_259534103.1 MULTISPECIES: GDP-mannose 4,6-dehydratase [unclassified Halalkaliarchaeum] diamond 267 179 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halalkaliarchaeum  
32373894 32373894 PRJEB76780_P_NODE_13019_length_243_cov_0.917647_g12919_i0 PRJEB76780 13019 243 0.917647 2.22988221 Haloarchaeobius litoreus 755306 Archaea Archaea 85.5 4.2e-19   NR WP_256398480.1 755306 g12919 i0 91.1 0.555555555555556 45 4 55.6 0 3 137 95 139 WP_256398480.1 universal stress protein [Haloarchaeobius litoreus] diamond 135 85.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halorubellaceae Haloarchaeobius Haloarchaeobius litoreus
32405482 32405482 PRJEB76780_P_NODE_3739_length_422_cov_1.306590_g3639_i0 PRJEB76780 3739 422 1.30659 5.5138098 Halanaeroarchaeum sp. HSR-CO 2866382 Archaea Archaea 243 4.75e-78   NR WP_259517405.1 2866382 g3639 i0 86.4 0.995260663507109 140 19 99.5 0 1 420 56 195 WP_259517405.1 tyrosine-type recombinase/integrase [Halanaeroarchaeum sp. HSR-CO] diamond 420 243 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halanaeroarchaeum Halanaeroarchaeum sp. HSR-CO
32468914 32468914 PRJEB76780_P_NODE_13619_length_228_cov_2.012903_g13519_i0 PRJEB76780 13619 228 2.012903 4.5894188400000004 Halanaeroarchaeum sp. 1963275 Archaea Archaea 115 1.63e-28   NR MFB6124635.1 1963275 g13519 i0 70.7 1.97368421052632 75 22 98.7 0 227 3 34 108 MFB6124635.1 glycerate kinase [Halanaeroarchaeum sp.] diamond 450 115 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halanaeroarchaeum Halanaeroarchaeum sp.
32500521 32500521 PRJEB76780_P_NODE_10859_length_251_cov_0.876404_g10759_i0 PRJEB76780 10859 251 0.876404 2.19977404 Haloplanus sp. GCM1 1961696 Archaea Archaea 111 2.56e-29   NR WP_379797224.1 3252679 g10759 i0 67.5 1.97211155378486 83 27 99.2 0 250 2 13 95 WP_379797224.1 hypothetical protein [Haloplanus sp. GCM10025708] diamond 495 111 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus sp. GCM10025708
32752550 32752550 PRJEB76780_P_NODE_11740_length_248_cov_0.891429_g11640_i0 PRJEB76780 11740 248 0.891429 2.21074392 Natronococcus pandeyae 2055836 Archaea Archaea 163 2.49e-46   NR WP_148856307.1 2055836 g11640 i0 95.1 1.98387096774194 82 4 99.2 0 246 1 264 345 WP_148856307.1 HD domain-containing protein [Natronococcus pandeyae] diamond 492 163 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronococcus Natronococcus pandeyae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;