RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB7614" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7614 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32981185 32981185 PRJEB7614a_S_NODE_60115_length_248_cov_3.708920_g58911_i0 PRJEB7614 60115 248 3.70892 9.1981216 Lasius niger 67767 Arthropoda Arthropoda 47.4 8.09e-4   NR KMQ86303.1 67767 g58911 i0 45 0.483870967741935 40 22 48.4 0 3 122 206 245 KMQ86303.1 copia protein [Lasius niger] diamond 120 47.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Formicidae Lasius Lasius niger
33134654 33134654 PRJEB7614a_S_NODE_52103_length_266_cov_4.476190_g50899_i0 PRJEB7614 52103 266 4.47619 11.9066654 Myzus persicae 13164 Arthropoda Arthropoda 42.7 0.0495   NR XP_022163951.1 13164 g50899 i0 55.6 0.406015037593985 36 16 40.6 0 138 245 543 578 XP_022163951.1 uncharacterized protein LOC111029296 [Myzus persicae] diamond 108 42.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Myzus Myzus persicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;