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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJEB75230" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 18 ✖

tax_clade 1

bioproject 1

  • PRJEB75230 · 18 ✖

analysis 1

  • diamond · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3963354 3963354 PRJEB75230_P_NODE_4024_length_681_cov_1.388158_g3848_i0 PRJEB75230 4024 681 1.388158 9.45335598 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 294 1.92e-94   NR XP_028866056.1 189622 g3848 i0 78.9 11.0396475770925 180 38 79.3 0 542 3 6 185 XP_028866056.1 eukaryotic translation initiation factor 2 gamma [Babesia ovata] diamond 7518 295 0.996610169491525 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
5238947 5238947 PRJEB75230_P_NODE_152685_length_246_cov_0.878613_g152503_i0 PRJEB75230 152685 246 0.878613 2.16138798 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 130 1.24e-35   NR XP_029217043.1 94643 g152503 i0 75.3 12.8414634146341 81 20 98.8 0 2 244 118 198 XP_029217043.1 putative proteasome subunit alpha type [Besnoitia besnoiti] diamond 3159 130 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
24362773 24362773 PRJEB75230_P_NODE_27940_length_355_cov_1.297872_g27758_i0 PRJEB75230 27940 355 1.297872 4.6074456 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 155 3.49e-43   NR XP_029219060.1 94643 g27758 i0 63.6 11.0450704225352 118 41 98.9 2 354 4 70 186 XP_029219060.1 ribosomal protein RPL3 [Besnoitia besnoiti] diamond 3921 155 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
27279915 27279915 PRJEB75230_P_NODE_84303_length_276_cov_1.266010_g84121_i0 PRJEB75230 84303 276 1.26601 3.4941876 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 120 3.53e-29   NR XP_013335666.1 5804 g84121 i0 59.8 34.2282608695652 92 36 98.9 1 274 2 209 300 XP_013335666.1 polyadenylate-binding protein, putative [Eimeria maxima] diamond 9447 120 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
27445328 27445328 PRJEB75230_P_NODE_160603_length_244_cov_0.900585_g160421_i0 PRJEB75230 160603 244 0.900585 2.1974274 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.0192   NR ABC95965.1 5833 g160421 i0 35.6 0.725409836065574 59 35 72.5 2 4 180 19 74 ABC95965.1 EMP1 variant U8b, partial [Plasmodium falciparum] diamond 177 42.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
28392264 28392264 PRJEB75230_P_NODE_176146_length_242_cov_0.911243_g175964_i0 PRJEB75230 176146 242 0.911243 2.20520806 Plasmodium malariae 5858 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0149   NR XP_028859977.1 5858 g175964 i0 47.9 0.59504132231405 48 23 59.5 1 235 92 594 639 XP_028859977.1 conserved Plasmodium protein, unknown function [Plasmodium malariae] diamond 144 43.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
28455607 28455607 PRJEB75230_P_NODE_20806_length_381_cov_1.000000_g20624_i0 PRJEB75230 20806 381 1 3.81 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0292   NR AIZ73304.1 5833 g20624 i0 63.6 0.259842519685039 33 12 26 0 130 32 81 113 AIZ73304.1 erythrocyte membrane protein 1, partial [Plasmodium falciparum] diamond 99 43.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
28834276 28834276 PRJEB75230_P_NODE_166288_length_243_cov_1.358824_g166106_i0 PRJEB75230 166288 243 1.358824 3.30194232 Cryptosporidium andersoni 117008 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0259   NR XP_067068408.1 117008 g166106 i0 31.1 0.91358024691358 74 39 87.7 3 2 214 143 207 XP_067068408.1 TBC domain-containing protein [Cryptosporidium andersoni] diamond 222 43.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium andersoni
29024121 29024121 PRJEB75230_P_NODE_118048_length_251_cov_0.865169_g117866_i0 PRJEB75230 118048 251 0.865169 2.17157419 Plasmodium vivax 5855 SAR_Eukaryotes SAR_Eukaryotes 45.4 8.96e-4   NR CAA67111.1 5855 g117866 i0 51.7 0.693227091633466 58 26 68.1 2 8 178 37 93 CAA67111.1 PV14 [Plasmodium vivax] diamond 174 45.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax
29395405 29395405 PRJEB75230_P_NODE_78389_length_281_cov_1.197115_g78207_i0 PRJEB75230 78389 281 1.197115 3.36389315 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 67.8 9.16e-11   NR XP_067071692.1 5824 g78207 i0 48.5 1.45195729537367 68 32 71.5 3 279 79 660 725 XP_067071692.1 glutamate--tRNA ligase [Plasmodium brasilianum] diamond 408 67.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
30476702 30476702 PRJEB75230_P_NODE_24253_length_367_cov_1.312925_g24071_i0 PRJEB75230 24253 367 1.312925 4.81843475 Toxoplasma gondii RUB 935652 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.0159   NR KFG56670.1 935652 g24071 i0 45.7 0.376021798365123 46 22 35.1 1 169 41 6 51 KFG56670.1 hypothetical protein TGRUB_433900 [Toxoplasma gondii RUB] diamond 138 45.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
30816837 30816837 PRJEB75230_P_NODE_54474_length_306_cov_1.321888_g54292_i0 PRJEB75230 54474 306 1.321888 4.04497728 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 105 9.87e-24   NR POM82909.1 93969 g54292 i0 50 22.3333333333333 98 49 96.1 0 8 301 641 738 POM82909.1 Helicase associated domain (HA2) family protein [Cryptosporidium meleagridis] diamond 6834 106 0.990566037735849 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium meleagridis
30943360 30943360 PRJEB75230_P_NODE_185954_length_227_cov_2.454545_g185772_i0 PRJEB75230 185954 227 2.454545 5.57181715 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.5 1.43e-8   NR XP_012766530.1 5866 g185772 i0 79.4 3.62114537444934 34 7 44.9 0 1 102 273 306 XP_012766530.1 DNA repair protein Rad23, putatitve, putative [Babesia bigemina] diamond 822 60.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
31645923 31645923 PRJEB75230_P_NODE_89197_length_272_cov_1.160804_g89015_i0 PRJEB75230 89197 272 1.160804 3.15738688 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0402   NR XP_028871900.1 462227 g89015 i0 38 0.783088235294118 71 35 77.2 3 7 216 1851 1913 XP_028871900.1 E3 ubiquitin-protein ligase PRT6 [Babesia sp. Xinjiang] diamond 213 43.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
31709338 31709338 PRJEB75230_P_NODE_176237_length_242_cov_0.911243_g176055_i0 PRJEB75230 176237 242 0.911243 2.20520806 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00774   NR CAL7865976.1 1344799 g176055 i0 32.8 0.830578512396694 67 36 80.6 3 21 215 50 109 CAL7865976.1 unnamed protein product [Sarcocystis calchasi] diamond 201 44.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31930652 31930652 PRJEB75230_P_NODE_174117_length_242_cov_0.911243_g173935_i0 PRJEB75230 174117 242 0.911243 2.20520806 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00848   NR XP_067922887.1 483139 g173935 i0 44.4 0.669421487603306 54 28 65.7 2 163 5 9 61 XP_067922887.1 uncharacterized protein CSUI_004957 [Cystoisospora suis] diamond 162 44.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
32657680 32657680 PRJEB75230_P_NODE_10800_length_458_cov_4.083117_g10618_i0 PRJEB75230 10800 458 4.083117 18.70067586 Eimeria brunetti 51314 SAR_Eukaryotes SAR_Eukaryotes 67.4 3.11e-10   NR CDJ49354.1 51314 g10618 i0 36.2 1.60480349344978 116 65 72.7 5 339 7 46 157 CDJ49354.1 thioredoxin, putative [Eimeria brunetti] diamond 735 67.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria brunetti
32878423 32878423 PRJEB75230_P_NODE_54880_length_306_cov_0.991416_g54698_i0 PRJEB75230 54880 306 0.991416 3.03373296 Plasmodium ovale wallikeri 864142 SAR_Eukaryotes SAR_Eukaryotes 56.2 1.31e-6   NR SBT55413.1 864142 g54698 i0 55.8 0.42156862745098 43 19 42.2 0 208 80 300 342 SBT55413.1 PIR Superfamily Protein [Plasmodium ovale wallikeri] diamond 129 56.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;