RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB75230" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJEB75230 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28771118 28771118 PRJEB75230_P_NODE_55247_length_305_cov_1.327586_g55065_i0 PRJEB75230 55247 305 1.327586 4.0491373 Chlorovirus heliozoae 322019 Viruses Viruses 42.4 0.0208   NR YP_001427234.1 322019 g55065 i0 39 0.757377049180328 77 43 75.7 3 55 285 7 79 YP_001427234.1 hypothetical protein ATCV1_z753L [Chlorovirus heliozoae] diamond 231 42.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Chlorovirus Chlorovirus heliozoae
31393203 31393203 PRJEB75230_P_NODE_57276_length_303_cov_1.004348_g57094_i0 PRJEB75230 57276 303 1.004348 3.04317444 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 53.5 6.44e-6   NR YP_009448950.1 2023057 g57094 i0 61 0.801980198019802 41 16 40.6 0 302 180 171 211 YP_009448950.1 Synaptobrevin/VAMP-like protein [Orpheovirus IHUMI-LCC2] diamond 243 53.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;