RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB75227" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB75227 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31614388 31614388 PRJEB75227_P_NODE_5716_length_292_cov_0.908676_g5545_i0 PRJEB75227 5716 292 0.908676 2.65333392 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 96.3 7.68e-21   NR XP_065069548.1 499914 g5545 i0 56.3 0.986301369863014 96 40 98.6 1 290 3 120 213 XP_065069548.1 ammonium transporter Rh type B-like [Rhopilema esculentum] diamond 288 96.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
32152251 32152251 PRJEB75227_P_NODE_7798_length_258_cov_2.108108_g7627_i0 PRJEB75227 7798 258 2.108108 5.43891864 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 94.4 3.12e-20   NR XP_066923410.1 252671 g7627 i0 52.9 0.988372093023256 85 40 98.8 0 1 255 446 530 XP_066923410.1 sphingosine-1-phosphate lyase 1-like [Clytia hemisphaerica] diamond 255 94.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;