RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB75227" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJEB75227 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27413699 27413699 PRJEB75227_P_NODE_11383_length_243_cov_0.917647_g11212_i0 PRJEB75227 11383 243 0.917647 2.22988221 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 167 3.22e-47   NR MDD4325297.1 2026714 g11212 i0 98.8 2 81 1 100 0 1 243 58 138 MDD4325297.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 486 167 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
27792448 27792448 PRJEB75227_P_NODE_11684_length_242_cov_0.923077_g11513_i0 PRJEB75227 11684 242 0.923077 2.23384634 Thermoproteota archaeon 2056631 Archaea Archaea 150 2.22e-45   NR MDP9211234.1 2056631 g11513 i0 98.7 0.979338842975207 79 1 97.9 0 238 2 1 79 MDP9211234.1 U6 snRNA-associated Sm-like protein LSm6 [Thermoproteota archaeon] diamond 237 150 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;