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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJEB75017" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJEB75017 · 10 ✖

analysis 1

  • diamond · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6513470 6513470 PRJEB75017_P_NODE_18086_length_243_cov_0.917647_g17957_i0 PRJEB75017 18086 243 0.917647 2.22988221 Desulfovibrio sp. 885 Bacteria Bacteria 172 9.58e-51   NR MBI5520023.1 885 g17957 i0 98.8 1 81 1 100 0 243 1 234 314 MBI5520023.1 BMP family ABC transporter substrate-binding protein [Desulfovibrio sp.] diamond 243 172 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp.
12888895 12888895 PRJEB75017_P_NODE_1371_length_738_cov_1.324812_g1250_i0 PRJEB75017 1371 738 1.324812 9.77711256 Pseudomonadati 3379134 Bacteria Bacteria 228 5.84e-72   NR WP_027368314.1 873 g1250 i0 59.5 6.51626016260163 200 80 80.9 1 67 663 4 203 WP_027368314.1 NAD(P)H:quinone oxidoreductase [Desulfocurvibacter africanus] diamond 4809 229 0.995633187772926 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfocurvibacter Desulfocurvibacter africanus
18847273 18847273 PRJEB75017_P_NODE_17575_length_244_cov_0.912281_g17446_i0 PRJEB75017 17575 244 0.912281 2.22596564 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 164 3.6899999999999996e-47   NR MEF8889008.1 2683721 g17446 i0 97.5 0.995901639344262 81 2 99.6 0 1 243 226 306 MEF8889008.1 GTP-binding protein [Desulfohalobiaceae bacterium] diamond 243 164 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
26590667 26590667 PRJEB75017_P_NODE_14661_length_251_cov_0.876404_g14532_i0 PRJEB75017 14661 251 0.876404 2.19977404 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 161 7.27e-46   NR MCF8086366.1 2683721 g14532 i0 94 0.99203187250996006 83 5 99.2 0 2 250 71 153 MCF8086366.1 IMP cyclohydrolase [Desulfohalobiaceae bacterium] diamond 249 161 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
26773787 26773787 PRJEB75017_P_NODE_18841_length_228_cov_2.012903_g18712_i0 PRJEB75017 18841 228 2.012903 4.5894188400000004 Bacteria 2 Bacteria Bacteria 67.4 9.02e-13   NR UCG80027.1 2044940 g18712 i0 82.1 2.03947368421053 39 7 51.3 0 1 117 36 74 UCG80027.1 MAG: hypothetical protein JSV60_08655, partial [Desulfobacterales bacterium] diamond 465 67.8 0.994100294985251 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
28550281 28550281 PRJEB75017_P_NODE_15527_length_249_cov_0.886364_g15398_i0 PRJEB75017 15527 249 0.886364 2.20704636 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 65.9 3.41e-12   NR MEF8823040.1 2683721 g15398 i0 89.7 0.469879518072289 39 3 47 1 247 131 25 62 MEF8823040.1 hypothetical protein [Desulfohalobiaceae bacterium] diamond 117 65.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
29812934 29812934 PRJEB75017_P_NODE_17271_length_245_cov_0.906977_g17142_i0 PRJEB75017 17271 245 0.906977 2.22209365 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 145 5.739999999999999e-40   NR MEF8942342.1 2683721 g17142 i0 90.1 0.991836734693878 81 8 99.2 0 245 3 43 123 MEF8942342.1 FAD-dependent oxidoreductase [Desulfohalobiaceae bacterium] diamond 243 145 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
30469545 30469545 PRJEB75017_P_NODE_14793_length_251_cov_0.876404_g14664_i0 PRJEB75017 14793 251 0.876404 2.19977404 root 1 Root_unresolved Root_unresolved 55.5 1.41e-6   NR ETR71966.1 890399 g14664 i0 38.4 7.27888446215139 86 42 90.8 2 250 23 2394 2478 ETR71966.1 MAG: hypothetical protein OMM_07788, partial [Candidatus Magnetoglobus multicellularis str. Araruama] diamond 1827 55.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Candidatus Magnetoglobus Candidatus Magnetoglobus multicellularis
31013578 31013578 PRJEB75017_P_NODE_15115_length_250_cov_0.881356_g14986_i0 PRJEB75017 15115 250 0.881356 2.20339 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 86.7 1.24e-17   NR MEF8888419.1 2683721 g14986 i0 71.2 0.876 73 21 87.6 0 234 16 1 73 MEF8888419.1 divergent polysaccharide deacetylase family protein [Desulfohalobiaceae bacterium] diamond 219 86.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
32563764 32563764 PRJEB75017_P_NODE_12299_length_266_cov_1.616580_g12170_i0 PRJEB75017 12299 266 1.61658 4.3001028 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 144 4.26e-38   NR MEF8824560.1 2683721 g12170 i0 93.1 0.81203007518797 72 5 81.2 0 216 1 1 72 MEF8824560.1 aldehyde ferredoxin oxidoreductase family protein [Desulfohalobiaceae bacterium] diamond 216 144 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;