RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB75017" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJEB75017 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27413662 27413662 PRJEB75017_P_NODE_14403_length_252_cov_0.871508_g14274_i0 PRJEB75017 14403 252 0.871508 2.19620016 Pseudomonas phage vB_PaeM_PA5oct 2163605 Viruses Viruses 83.6 6.18e-17   NR YP_010679021.1 2163605 g14274 i0 51.9 1.80952380952381 79 38 94 0 245 9 101 179 YP_010679021.1 hypothetical protein PQE65_gp193 [Pseudomonas phage vB_PaeM_PA5oct] diamond 456 83.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Arenbergviridae Wroclawvirus Wroclawvirus PA5oct
27886960 27886960 PRJEB75017_P_NODE_17085_length_245_cov_0.906977_g16956_i0 PRJEB75017 17085 245 0.906977 2.22209365 Vibrio phage VvAW1 1168281 Viruses Viruses 77.8 7.2e-15   NR YP_007518375.1 1168281 g16956 i0 59.4 0.844897959183673 69 24 82 2 243 43 230 296 YP_007518375.1 replication initiation protein [Vibrio phage VvAW1] diamond 207 77.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage VvAW1
31962294 31962294 PRJEB75017_P_NODE_16218_length_247_cov_0.896552_g16089_i0 PRJEB75017 16218 247 0.896552 2.21448344 Salicola phage SCTP-2 2015814 Viruses Viruses 46.6 0.00154   NR ASV44093.1 2015814 g16089 i0 50 0.510121457489879 42 20 51 1 12 137 253 293 ASV44093.1 dihydrofolate-thymadylate synthase-like protein [Salicola phage SCTP-2] diamond 126 46.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Salicola phage SCTP-2
32595140 32595140 PRJEB75017_P_NODE_7920_length_319_cov_1.268293_g7791_i0 PRJEB75017 7920 319 1.268293 4.04585467 uncultured Caudovirales phage 2100421 Viruses Viruses 64.3 1.27e-9   NR CAB4185846.1 2100421 g7791 i0 33.3 0.987460815047022 105 61 98.7 3 315 1 88 183 CAB4185846.1 Glycosyltransferase, DXD sugar-binding motif [uncultured Caudovirales phage] diamond 315 64.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;