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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJEB7366" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 17 ✖

tax_clade 1

bioproject 1

  • PRJEB7366 · 17 ✖

analysis 1

  • diamond · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3961325 3961325 PRJEB7366_P_NODE_11584_length_239_cov_1.436275_g11150_i0 PRJEB7366 11584 239 1.436275 3.43269725 Amoeba proteus 5775 Tubulinea other_Eukaryota 152 1.12e-42   NR AAP88974.1 5775 g11150 i0 89.9 0.99163179916318 79 8 99.2 0 238 2 92 170 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 237 152 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
3961385 3961385 PRJEB7366_P_NODE_5044_length_405_cov_1.581081_g4611_i0 PRJEB7366 5044 405 1.581081 6.40337805 Amoeba proteus 5775 Tubulinea other_Eukaryota 246 1.95e-78   NR AAP88974.1 5775 g4611 i0 88.1 0.992592592592593 134 16 99.3 0 3 404 203 336 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 402 246 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
26907576 26907576 PRJEB7366_P_NODE_2462_length_616_cov_3.280551_g2080_i0 PRJEB7366 2462 616 3.280551 20.20819416 Copromyxa protea 931554 Tubulinea other_Eukaryota 375 8.38e-127   NR BAN33737.1 931554 g2080 i0 89.5 0.974025974025974 200 21 97.4 0 615 16 263 462 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 600 375 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
27152903 27152903 PRJEB7366_P_NODE_9062_length_280_cov_1.795918_g8628_i0 PRJEB7366 9062 280 1.795918 5.0285704 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 140 4.03e-37   NR BAN33737.1 931554 g8628 i0 83.5 3.675 79 13 84.6 0 238 2 244 322 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 1029 141 0.99290780141844 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
27160287 27160287 PRJEB7366_P_NODE_23982_length_153_cov_1.355932_g23548_i0 PRJEB7366 23982 153 1.355932 2.07457596 Chaos carolinense 160823 Tubulinea other_Eukaryota 100 2.5399999999999998e-24   NR AFX73090.1 160823 g23548 i0 96 0.980392156862745 50 2 98 0 2 151 197 246 AFX73090.1 elongation factor 2 alpha, partial [Chaos carolinense] diamond 150 100 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
27192036 27192036 PRJEB7366_P_NODE_9482_length_272_cov_1.734177_g9048_i0 PRJEB7366 9482 272 1.734177 4.71696144 Copromyxa protea 931554 Tubulinea other_Eukaryota 172 2.48e-49   NR BAN33737.1 931554 g9048 i0 87.8 0.992647058823529 90 11 99.3 0 272 3 321 410 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 270 172 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
27350472 27350472 PRJEB7366_P_NODE_16023_length_194_cov_1.962264_g15589_i0 PRJEB7366 16023 194 1.962264 3.80679216 Copromyxa protea 931554 Tubulinea other_Eukaryota 120 2.68e-30   NR BAN33737.1 931554 g15589 i0 88.9 0.974226804123711 63 7 97.4 0 2 190 340 402 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 189 120 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
28013492 28013492 PRJEB7366_P_NODE_22325_length_159_cov_3.032258_g21891_i0 PRJEB7366 22325 159 3.032258 4.82129022 Copromyxa protea 931554 Tubulinea other_Eukaryota 98.6 1.79e-22   NR BAN33737.1 931554 g21891 i0 90.4 0.981132075471698 52 5 98.1 0 157 2 408 459 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 156 98.6 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
28297388 28297388 PRJEB7366_P_NODE_11886_length_235_cov_1.400000_g11452_i0 PRJEB7366 11886 235 1.4 3.29 Amoeba proteus 5775 Tubulinea other_Eukaryota 135 4.05e-36   NR AAD37351.1 5775 g11452 i0 84.2 0.970212765957447 76 12 97 0 231 4 133 208 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 228 135 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
28297394 28297394 PRJEB7366_P_NODE_22286_length_160_cov_0.960000_g21852_i0 PRJEB7366 22286 160 0.96 1.536 Chaos carolinense 160823 Tubulinea other_Eukaryota 98.2 2.31e-24   NR AFX73058.1 160823 g21852 i0 86.5 0.975 52 7 97.5 0 158 3 63 114 AFX73058.1 14-3-3 protein, partial [Chaos carolinense] diamond 156 98.2 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
28771021 28771021 PRJEB7366_P_NODE_1787_length_733_cov_1.871060_g1452_i0 PRJEB7366 1787 733 1.87106 13.7148698 Copromyxa protea 931554 Tubulinea other_Eukaryota 401 2.8e-136   NR BAN33737.1 931554 g1452 i0 77.7 1.01091405184175 247 52 99.9 1 1 732 167 413 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 741 401 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
29181720 29181720 PRJEB7366_P_NODE_20289_length_169_cov_1.179104_g19855_i0 PRJEB7366 20289 169 1.179104 1.99268576 Copromyxa protea 931554 Tubulinea other_Eukaryota 106 2.43e-25   NR BAN33737.1 931554 g19855 i0 91.1 1.97041420118343 56 5 99.4 0 2 169 123 178 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 333 106 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
30697548 30697548 PRJEB7366_P_NODE_22214_length_160_cov_1.280000_g21780_i0 PRJEB7366 22214 160 1.28 2.048 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 41.2 0.0415   NR AAY21191.1 5778 g21780 i0 45.5 1.65 44 24 82.5 0 159 28 199 242 AAY21191.1 Rpl7A, partial [Vermamoeba vermiformis] diamond 264 41.2 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
30824036 30824036 PRJEB7366_P_NODE_5954_length_365_cov_1.678788_g5521_i0 PRJEB7366 5954 365 1.678788 6.1275762 Copromyxa protea 931554 Tubulinea other_Eukaryota 167 5.16e-47   NR BAN33737.1 931554 g5521 i0 66.1 1.98082191780822 124 39 99.5 1 363 1 141 264 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 723 167 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
31076928 31076928 PRJEB7366_P_NODE_21095_length_165_cov_1.230769_g20661_i0 PRJEB7366 21095 165 1.230769 2.03076885 Chaos carolinense 160823 Tubulinea other_Eukaryota 94.4 9.78e-22   NR AFX73090.1 160823 g20661 i0 79.6 0.981818181818182 54 11 98.2 0 164 3 131 184 AFX73090.1 elongation factor 2 alpha, partial [Chaos carolinense] diamond 162 94.4 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
31322395 31322395 PRJEB7366_P_NODE_23095_length_156_cov_1.661157_g22661_i0 PRJEB7366 23095 156 1.661157 2.59140492 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 9.49e-24   NR BAN33737.1 931554 g22661 i0 96.1 5.88461538461539 51 2 98.1 0 2 154 80 130 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 918 102 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
32373799 32373799 PRJEB7366_P_NODE_21779_length_162_cov_1.244094_g21345_i0 PRJEB7366 21779 162 1.244094 2.01543228 Amoeba proteus 5775 Tubulinea other_Eukaryota 92.8 1.86e-20   NR AAD37351.1 5775 g21345 i0 79.6 1 54 11 100 0 1 162 108 161 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 162 92.8 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;