RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB7366" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7366 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26717152 26717152 PRJEB7366_P_NODE_10701_length_251_cov_2.791667_g10267_i0 PRJEB7366 10701 251 2.791667 7.00708417 Lentisphaerota bacterium 1932692 Bacteria Bacteria 140 5.4799999999999994e-37   NR NLB66717.1 1932692 g10267 i0 75.3 5.06772908366534 85 19 99.2 1 251 3 151 235 NLB66717.1 phosphoenolpyruvate carboxykinase (GTP) [Lentisphaerota bacterium] diamond 1272 140 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
28297392 28297392 PRJEB7366_P_NODE_20046_length_170_cov_1.185185_g19612_i0 PRJEB7366 20046 170 1.185185 2.0148145 Lentisphaeraceae bacterium 2461380 Bacteria Bacteria 72 4.99e-13   NR MCM8535136.1 2461380 g19612 i0 58.9 1.97647058823529 56 22 98.8 1 3 170 72 126 MCM8535136.1 galactose mutarotase [Lentisphaeraceae bacterium] diamond 336 72 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae   Lentisphaeraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;