RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB7366" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB7366 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27722343 27722343 PRJEB7366_P_NODE_14044_length_211_cov_1.363636_g13610_i0 PRJEB7366 14044 211 1.363636 2.87727196 Halovalidus 3383206 Archaea Archaea 88.2 2.17e-19   NR MBJ32717.1 2026739 g13610 i0 57.4 1.96208530805687 68 29 96.7 0 2 205 153 220 MBJ32717.1 adenylate kinase [Methanobacteriota archaeon] diamond 414 88.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31234660 31234660 PRJEB7366_P_NODE_22655_length_158_cov_1.536585_g22221_i0 PRJEB7366 22655 158 1.536585 2.4278043 Methanobrevibacter olleyae 294671 Archaea Archaea 40.8 0.0152   NR AMK16309.1 294671 g22221 i0 51.6 0.588607594936709 31 15 58.9 0 107 15 3 33 AMK16309.1 phage-related protein [Methanobrevibacter olleyae] diamond 93 40.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter olleyae
31329647 31329647 PRJEB7366_P_NODE_20656_length_167_cov_1.280303_g20222_i0 PRJEB7366 20656 167 1.280303 2.13810601 Theionarchaea archaeon DG-7 2747605 Archaea Archaea 72 2.8e-13   NR KYK33069.1 1803814 g20222 i0 59.6 3.66467065868263 52 21 93.4 0 4 159 35 86 KYK33069.1 MAG: glyoxal reductase [Theionarchaea archaeon DG-70-1] diamond 612 72 1 Archaea   Methanobacteriati Methanobacteriota Theionarchaea       Theionarchaea archaeon DG-70-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;