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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJEB7366" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 31 ✖

bioproject 1

  • PRJEB7366 · 31 ✖

analysis 1

  • diamond · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6513367 6513367 PRJEB7366_P_NODE_2766_length_575_cov_2.559259_g2365_i0 PRJEB7366 2766 575 2.559259 14.71573925 Planctomycetota bacterium 2026780 Bacteria Bacteria 186 7.909999999999999e-55   NR MFM7522431.1 2026780 g2365 i0 52.7 2.88 184 85 96 2 555 4 23 204 MFM7522431.1 glutamine synthetase type III [Planctomycetota bacterium] diamond 1656 186 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
19260834 19260834 PRJEB7366_P_NODE_16276_length_192_cov_2.038217_g15842_i0 PRJEB7366 16276 192 2.038217 3.91337664 Phycisphaerales bacterium 2052180 Bacteria Bacteria 88.2 3.94e-19   NR MBL8881156.1 2052180 g15842 i0 68.8 7.84375 64 20 100 0 192 1 83 146 MBL8881156.1 3-hydroxyacyl-CoA dehydrogenase family protein [Phycisphaerales bacterium] diamond 1506 88.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
26590643 26590643 PRJEB7366_P_NODE_16721_length_189_cov_1.610390_g16287_i0 PRJEB7366 16721 189 1.61039 3.0436371 Candidatus Protochlamydia phocaeensis 1414722 Bacteria Bacteria 55.5 6.02e-7   NR WP_068469007.1 1414722 g16287 i0 66.7 0.571428571428571 36 12 57.1 0 189 82 499 534 WP_068469007.1 ADP-ribosylhydrolase MavL family protein [Candidatus Protochlamydia phocaeensis] diamond 108 55.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia phocaeensis
26622526 26622526 PRJEB7366_P_NODE_5421_length_387_cov_1.863636_g4988_i0 PRJEB7366 5421 387 1.863636 7.21227132 Planctomycetota bacterium 2026780 Bacteria Bacteria 77 8.04e-14   NR MDX2017484.1 2026780 g4988 i0 43.3 0.751937984496124 97 51 75.2 2 74 364 125 217 MDX2017484.1 choice-of-anchor A family protein [Planctomycetota bacterium] diamond 291 77 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26717152 26717152 PRJEB7366_P_NODE_10701_length_251_cov_2.791667_g10267_i0 PRJEB7366 10701 251 2.791667 7.00708417 Lentisphaerota bacterium 1932692 Bacteria Bacteria 140 5.4799999999999994e-37   NR NLB66717.1 1932692 g10267 i0 75.3 5.06772908366534 85 19 99.2 1 251 3 151 235 NLB66717.1 phosphoenolpyruvate carboxykinase (GTP) [Lentisphaerota bacterium] diamond 1272 140 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
26970711 26970711 PRJEB7366_P_NODE_12382_length_229_cov_1.329897_g11948_i0 PRJEB7366 12382 229 1.329897 3.04546413 Chthoniobacter sp. 2510640 Bacteria Bacteria 110 4.33e-26   NR MCE9611332.1 2510640 g11948 i0 71.2 2.86899563318777 73 21 95.6 0 1 219 587 659 MCE9611332.1 transketolase [Chthoniobacter sp.] diamond 657 110 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter sp.
27311633 27311633 PRJEB7366_P_NODE_823_length_1073_cov_3.099229_g607_i0 PRJEB7366 823 1073 3.099229 33.25472717 Pseudomonadati 3379134 Bacteria Bacteria 49.7 0.0219   NR MCA9291207.1 2052180 g607 i0 28.8 1.31127679403541 205 114 54 8 274 852 841 1025 MCA9291207.1 filamentous hemagglutinin N-terminal domain-containing protein [Phycisphaerales bacterium] diamond 1407 50.1 0.992015968063872 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
27318721 27318721 PRJEB7366_P_NODE_12903_length_223_cov_1.276596_g12469_i0 PRJEB7366 12903 223 1.276596 2.84680908 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 53.9 3.35e-6   NR HEY1171809.1 2499141 g12469 i0 43.5 0.928251121076233 69 37 92.8 1 1 207 451 517 HEY1171809.1 ankyrin repeat domain-containing protein [Verrucomicrobiia bacterium] diamond 207 53.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27571238 27571238 PRJEB7366_P_NODE_6824_length_335_cov_2.693333_g6390_i0 PRJEB7366 6824 335 2.693333 9.02266555 Phycisphaerae bacterium RAS1 2528034 Bacteria Bacteria 58.2 4.22e-7   NR TWT44212.1 2528034 g6390 i0 46.2 0.698507462686567 78 40 69 2 328 98 667 743 TWT44212.1 Glutamine synthetase [Phycisphaerae bacterium RAS1] diamond 234 58.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium RAS1
28139857 28139857 PRJEB7366_P_NODE_16765_length_189_cov_1.292208_g16331_i0 PRJEB7366 16765 189 1.292208 2.44227312 Planctomycetota bacterium 2026780 Bacteria Bacteria 57.8 7.57e-8   NR MEE8468276.1 2026780 g16331 i0 65.7 1.66666666666667 35 12 55.6 0 187 83 261 295 MEE8468276.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein [Planctomycetota bacterium] diamond 315 57.8 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28297392 28297392 PRJEB7366_P_NODE_20046_length_170_cov_1.185185_g19612_i0 PRJEB7366 20046 170 1.185185 2.0148145 Lentisphaeraceae bacterium 2461380 Bacteria Bacteria 72 4.99e-13   NR MCM8535136.1 2461380 g19612 i0 58.9 1.97647058823529 56 22 98.8 1 3 170 72 126 MCM8535136.1 galactose mutarotase [Lentisphaeraceae bacterium] diamond 336 72 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae   Lentisphaeraceae bacterium
28763790 28763790 PRJEB7366_P_NODE_15407_length_199_cov_1.219512_g14973_i0 PRJEB7366 15407 199 1.219512 2.42682888 Pseudomonadati 3379134 Bacteria Bacteria 48.9 1.33e-4   NR MEM1165877.1 2026780 g14973 i0 52.4 3.18090452261307 42 20 63.3 0 197 72 361 402 MEM1165877.1 zinc metallochaperone GTPase ZigA [Planctomycetota bacterium] diamond 633 49.3 0.991886409736308 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28953569 28953569 PRJEB7366_P_NODE_9328_length_275_cov_2.466667_g8894_i0 PRJEB7366 9328 275 2.466667 6.78333425 Bacteria 2 Bacteria Bacteria 59.7 1.14e-8   NR MBW7991269.1 2026780 g8894 i0 44.8 2.94545454545455 67 33 73.1 1 270 70 98 160 MBW7991269.1 ferritin family protein [Planctomycetota bacterium] diamond 810 59.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29086964 29086964 PRJEB7366_P_NODE_20368_length_168_cov_2.308271_g19934_i0 PRJEB7366 20368 168 2.308271 3.87789528 Phycisphaerae bacterium 2026778 Bacteria Bacteria 51.6 9.92e-6   NR MFQ5414057.1 2026778 g19934 i0 43.8 0.857142857142857 48 26 83.9 1 158 18 341 388 MFQ5414057.1 hypothetical protein [Phycisphaerae bacterium] diamond 144 51.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
29521630 29521630 PRJEB7366_P_NODE_5650_length_377_cov_1.614035_g5217_i0 PRJEB7366 5650 377 1.614035 6.08491195 Pseudomonadati 3379134 Bacteria Bacteria 52.4 6.69e-5   NR OPZ98894.1 1852905 g5217 i0 43.5 4.3368700265252 69 38 54.1 1 52 255 392 460 OPZ98894.1 MAG: Large cysteine-rich periplasmic protein OmcB precursor [Planctomycetes bacterium ADurb.Bin412] diamond 1635 52.8 0.992424242424242 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium ADurb.Bin412
29528981 29528981 PRJEB7366_P_NODE_9590_length_270_cov_1.519149_g9156_i0 PRJEB7366 9590 270 1.519149 4.1017023 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 102 7.539999999999999e-23   NR MFC1703536.1 2035772 g9156 i0 58 2.93333333333333 88 37 97.8 0 3 266 1221 1308 MFC1703536.1 proline dehydrogenase family protein [Candidatus Omnitrophota bacterium] diamond 792 102 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29686394 29686394 PRJEB7366_P_NODE_10310_length_257_cov_2.103604_g9876_i0 PRJEB7366 10310 257 2.103604 5.40626228 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 93.2 8.13e-20   NR MFH1245282.1 2035772 g9876 i0 54.1 0.992217898832685 85 39 99.2 0 256 2 1623 1707 MFH1245282.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 255 93.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29837282 29837282 PRJEB7366_P_NODE_19871_length_171_cov_1.176471_g19437_i0 PRJEB7366 19871 171 1.176471 2.01176541 PVC group 1783257 Bacteria Bacteria 52 7.56e-6   NR MDB6077804.1 2562705 g19437 i0 47.5 1.94736842105263 59 27 96.5 2 169 5 133 191 MDB6077804.1 Por secretion system C-terminal sorting protein [Akkermansiaceae bacterium] diamond 333 52.4 0.99236641221374 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
29876284 29876284 PRJEB7366_P_NODE_16031_length_194_cov_1.761006_g15597_i0 PRJEB7366 16031 194 1.761006 3.41635164 Planctomycetota bacterium 2026780 Bacteria Bacteria 50.1 5.03e-5   NR MFH1268967.1 2026780 g15597 i0 53.5 0.664948453608247 43 20 66.5 0 62 190 293 335 MFH1268967.1 TMEM143 family protein [Planctomycetota bacterium] diamond 129 50.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30065612 30065612 PRJEB7366_P_NODE_7592_length_313_cov_2.158273_g7158_i0 PRJEB7366 7592 313 2.158273 6.75539449 Phycisphaerales bacterium 2052180 Bacteria Bacteria 138 2.8099999999999997e-35   NR HMN42288.1 2052180 g7158 i0 55.8 0.996805111821086 104 46 99.7 0 2 313 1349 1452 HMN42288.1 GC-type dockerin domain-anchored protein [Phycisphaerales bacterium] diamond 312 138 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
30090005 30090005 PRJEB7366_P_NODE_19072_length_175_cov_1.142857_g18638_i0 PRJEB7366 19072 175 1.142857 1.99999975 Bacteria 2 Bacteria Bacteria 82 2.11e-16   NR MDP9173442.1 2026780 g18638 i0 60.7 3.92571428571429 56 22 96 0 2 169 370 425 MDP9173442.1 phosphoglycerate dehydrogenase [Planctomycetota bacterium] diamond 687 82 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30097227 30097227 PRJEB7366_P_NODE_23072_length_156_cov_1.983471_g22638_i0 PRJEB7366 23072 156 1.983471 3.09421476 Verrucomicrobiota bacterium JB022 3064551 Bacteria Bacteria 84.3 1.84e-17   NR MDP0501723.1 3064551 g22638 i0 75 1 52 13 100 0 1 156 45 96 MDP0501723.1 ADP-forming succinate--CoA ligase subunit beta [Verrucomicrobiota bacterium JB022] diamond 156 84.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium JB022
30413569 30413569 PRJEB7366_P_NODE_11293_length_243_cov_1.471154_g10859_i0 PRJEB7366 11293 243 1.471154 3.57490422 Phycisphaerae bacterium 2026778 Bacteria Bacteria 56.2 6.78e-7   NR MFQ5414057.1 2026778 g10859 i0 38.6 1.02469135802469 83 39 92.6 4 16 240 305 383 MFQ5414057.1 hypothetical protein [Phycisphaerae bacterium] diamond 249 56.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
30855582 30855582 PRJEB7366_P_NODE_8654_length_288_cov_1.739130_g8220_i0 PRJEB7366 8654 288 1.73913 5.0086944 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 116 9.71e-28   NR MEM9445814.1 2026799 g8220 i0 55 1.9375 100 41 100 1 288 1 510 609 MEM9445814.1 ATP-dependent chaperone ClpB [Verrucomicrobiota bacterium] diamond 558 116 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31519628 31519628 PRJEB7366_P_NODE_976_length_999_cov_4.215768_g739_i0 PRJEB7366 976 999 4.215768 42.11552232 Planctomycetota bacterium 2026780 Bacteria Bacteria 78.2 1.09e-13   NR MEW6744140.1 2026780 g739 i0 40.5 0.606606606606607 111 55 30 2 393 692 21 131 MEW6744140.1 hypothetical protein [Planctomycetota bacterium] diamond 606 78.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32049999 32049999 PRJEB7366_P_NODE_10718_length_251_cov_1.944444_g10284_i0 PRJEB7366 10718 251 1.944444 4.88055444 Bacteria 2 Bacteria Bacteria 90.1 8.98e-19   NR MAD25628.1 2026801 g10284 i0 47.6 4.85258964143426 82 41 95.6 2 2 241 609 690 MAD25628.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 1218 90.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
32113426 32113426 PRJEB7366_P_NODE_4038_length_463_cov_2.359813_g3613_i0 PRJEB7366 4038 463 2.359813 10.92593419 Bacteria 2 Bacteria Bacteria 160 2.06e-42   NR OQB82108.1 1852903 g3613 i0 75.3 3.16198704103672 97 24 62.9 0 461 171 839 935 OQB82108.1 MAG: Pyruvate, phosphate dikinase [Planctomycetes bacterium ADurb.Bin126] diamond 1464 160 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium ADurb.Bin126
32240116 32240116 PRJEB7366_P_NODE_16218_length_193_cov_1.012658_g15784_i0 PRJEB7366 16218 193 1.012658 1.95442994 Bacteria 2 Bacteria Bacteria 79.7 1.74e-15   NR MCE2983920.1 2052048 g15784 i0 60 2.82901554404145 60 24 93.3 0 185 6 1533 1592 MCE2983920.1 retroviral-like aspartic protease family protein [Parachlamydia sp.] diamond 546 79.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia sp.
32500420 32500420 PRJEB7366_P_NODE_17619_length_183_cov_1.851351_g17185_i0 PRJEB7366 17619 183 1.851351 3.38797233 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62.8 1.49e-9   NR MFC1703536.1 2035772 g17185 i0 49.1 3 55 28 90.2 0 180 16 1135 1189 MFC1703536.1 proline dehydrogenase family protein [Candidatus Omnitrophota bacterium] diamond 549 62.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32563746 32563746 PRJEB7366_P_NODE_10699_length_251_cov_2.981481_g10265_i0 PRJEB7366 10699 251 2.981481 7.48351731 Oceaniferula flava 2800421 Bacteria Bacteria 42.7 0.0407   NR WP_309489737.1 2800421 g10265 i0 38.7 0.896414342629482 75 45 88.4 1 229 8 84 158 WP_309489737.1 polyamine aminopropyltransferase [Oceaniferula flava] diamond 225 42.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Oceaniferula Oceaniferula flava
32626374 32626374 PRJEB7366_P_NODE_14740_length_205_cov_1.176471_g14306_i0 PRJEB7366 14740 205 1.176471 2.41176555 Phycisphaerales bacterium 2052180 Bacteria Bacteria 68.6 1.76e-11   NR HMN42288.1 2052180 g14306 i0 42.4 0.965853658536585 66 38 96.6 0 203 6 1355 1420 HMN42288.1 GC-type dockerin domain-anchored protein [Phycisphaerales bacterium] diamond 198 68.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;