RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB7366" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 3 ✖

bioproject 1

  • PRJEB7366 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16711900 16711900 PRJEB7366_P_NODE_10474_length_255_cov_1.454545_g10040_i0 PRJEB7366 10474 255 1.454545 3.70908975 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 60.1 1.2e-8   NR XP_013754718.1 461836 g10040 i0 58 0.811764705882353 69 26 77.6 2 2 199 77 145 XP_013754718.1 uncharacterized protein AMSG_09332 [Thecamonas trahens ATCC 50062] diamond 207 60.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28171138 28171138 PRJEB7366_P_NODE_21706_length_162_cov_1.574803_g21272_i0 PRJEB7366 21706 162 1.574803 2.55118086 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 84 3.63e-17   NR XP_013754784.1 461836 g21272 i0 65.4 0.962962962962963 52 18 96.3 0 2 157 247 298 XP_013754784.1 major vault protein [Thecamonas trahens ATCC 50062] diamond 156 84 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31582904 31582904 PRJEB7366_P_NODE_5736_length_374_cov_1.005900_g5303_i0 PRJEB7366 5736 374 1.0059 3.762066 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 120 2.49e-31   NR XP_013758125.1 461836 g5303 i0 51.3 0.938502673796791 117 56 93 1 374 27 77 193 XP_013758125.1 lipocalin family protein [Thecamonas trahens ATCC 50062] diamond 351 120 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;