contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJEB73599" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2270626 | 2270626 | PRJEB73599_P_NODE_4482_length_318_cov_2.484429_g4195_i0 | PRJEB73599 | 4482 | 318 | 2.484429 | 7.90048422 | Streptomyces polyasparticus | 2767826 | Bacteria | Bacteria | 172 | 1.9799999999999994e-52 | NR | WP_187820194.1 | 2767826 | g4195 | i0 | 87.9 | 0.933962264150943 | 99 | 10 | 93.4 | 1 | 20 | 316 | 35 | 131 | WP_187820194.1 chlorophyll a-b binding domain-containing protein, partial [Streptomyces polyasparticus] | diamond | 297 | 172 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces polyasparticus | ||
| 7787572 | 7787572 | PRJEB73599_P_NODE_727_length_886_cov_2.033839_g583_i0 | PRJEB73599 | 727 | 886 | 2.033839 | 18.01981354 | Nocardiopsis alborubida | 146802 | Bacteria | Bacteria | 95.5 | 7.78e-18 | NR | WP_168443938.1 | 146802 | g583 | i0 | 36 | 1.01580135440181 | 150 | 79 | 47.7 | 4 | 878 | 456 | 258 | 399 | WP_168443938.1 type I polyketide synthase [Nocardiopsis alborubida] | diamond | 900 | 95.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Nocardiopsidaceae | Nocardiopsis | Nocardiopsis alborubida | ||
| 27539762 | 27539762 | PRJEB73599_P_NODE_5364_length_276_cov_2.048583_g5077_i0 | PRJEB73599 | 5364 | 276 | 2.048583 | 5.65408908 | Streptomyces sp. NPDC | 1931 | Bacteria | Bacteria | 43.5 | 0.0295 | NR | WP_363135002.1 | 3157097 | g5077 | i0 | 43.8 | 0.521739130434783 | 48 | 27 | 52.2 | 0 | 88 | 231 | 84 | 131 | WP_363135002.1 PQQ-binding-like beta-propeller repeat protein [Streptomyces sp. NPDC050610] | diamond | 144 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NPDC050610 | ||
| 27729500 | 27729500 | PRJEB73599_P_NODE_1004_length_751_cov_4.897507_g827_i0 | PRJEB73599 | 1004 | 751 | 4.897507 | 36.78027757 | Actinomadura sp. | 1989 | Bacteria | Bacteria | 108 | 1.56e-24 | NR | HEV7933428.1 | 1989 | g827 | i0 | 32.4 | 0.838881491344874 | 210 | 135 | 81.5 | 4 | 704 | 93 | 18 | 226 | HEV7933428.1 hypothetical protein [Actinomadura sp.] | diamond | 630 | 108 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Thermomonosporaceae | Actinomadura | Actinomadura sp. | ||
| 28739515 | 28739515 | PRJEB73599_P_NODE_6767_length_226_cov_2.060914_g6480_i0 | PRJEB73599 | 6767 | 226 | 2.060914 | 4.65766564 | Acidimicrobiales bacterium | 2201156 | Bacteria | Bacteria | 101 | 2.45e-24 | NR | MCB0958566.1 | 2201156 | g6480 | i0 | 60 | 1.99115044247788 | 75 | 30 | 99.6 | 0 | 1 | 225 | 153 | 227 | MCB0958566.1 PqqD family peptide modification chaperone [Acidimicrobiales bacterium] | diamond | 450 | 101 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium | ||||
| 30350614 | 30350614 | PRJEB73599_P_NODE_6872_length_223_cov_2.262887_g6585_i0 | PRJEB73599 | 6872 | 223 | 2.262887 | 5.04623801 | Acidimicrobiales bacterium | 2201156 | Bacteria | Bacteria | 90.9 | 3.2e-20 | NR | MCB0958566.1 | 2201156 | g6585 | i0 | 53.4 | 5.91928251121076 | 73 | 34 | 98.2 | 0 | 221 | 3 | 153 | 225 | MCB0958566.1 PqqD family peptide modification chaperone [Acidimicrobiales bacterium] | diamond | 1320 | 90.9 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium | ||||
| 31132465 | 31132465 | PRJEB73599_P_NODE_755_length_868_cov_2.537545_g524_i2 | PRJEB73599 | 755 | 868 | 2.537545 | 22.0258906 | FCB group | 1783270 | Bacteria | Bacteria | 170 | 1.5899999999999996e-43 | NR | MCW2687244.1 | 1785 | g524 | i2 | 39.5 | 21.1624423963134 | 263 | 152 | 89.9 | 6 | 7 | 786 | 595 | 853 | MCW2687244.1 Polyketide synthase [Mycobacterium sp.] | diamond | 18369 | 170 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium sp. | ||
| 31354163 | 31354163 | PRJEB73599_P_NODE_7996_length_192_cov_1.754601_g7709_i0 | PRJEB73599 | 7996 | 192 | 1.754601 | 3.36883392 | FCB group | 1783270 | Bacteria | Bacteria | 71.6 | 4.62e-13 | NR | MEZ5183991.1 | 2201156 | g7709 | i0 | 46 | 4.90625 | 63 | 34 | 98.4 | 0 | 2 | 190 | 152 | 214 | MEZ5183991.1 PqqD family peptide modification chaperone [Acidimicrobiales bacterium] | diamond | 942 | 71.6 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium | ||||
| 31512449 | 31512449 | PRJEB73599_P_NODE_676_length_915_cov_2.551919_g524_i1 | PRJEB73599 | 676 | 915 | 2.551919 | 23.35005885 | delta/epsilon subdivisions | 68525 | Bacteria | Bacteria | 171 | 7.699999999999998e-44 | NR | WP_085249783.1 | 486698 | g524 | i1 | 38 | 21.2065573770492 | 266 | 154 | 85.9 | 5 | 46 | 831 | 571 | 829 | WP_085249783.1 type I polyketide synthase [Mycobacterium riyadhense] | diamond | 19404 | 172 | 0.994186046511628 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium riyadhense | ||
| 32057199 | 32057199 | PRJEB73599_P_NODE_10038_length_152_cov_2.853659_g9751_i0 | PRJEB73599 | 10038 | 152 | 2.853659 | 4.33756168 | Acidimicrobiales bacterium | 2201156 | Bacteria | Bacteria | 73.6 | 4.86e-14 | NR | MCB0958566.1 | 2201156 | g9751 | i0 | 61.7 | 0.927631578947368 | 47 | 18 | 92.8 | 0 | 3 | 143 | 183 | 229 | MCB0958566.1 PqqD family peptide modification chaperone [Acidimicrobiales bacterium] | diamond | 141 | 73.6 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;