contig_metadata
7 rows where analysis = "diamond", bioproject = "PRJEB73599" and tax_clade = "Amoebozoa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2685285 | 2685285 | PRJEB73599_P_NODE_843_length_822_cov_2.448928_g682_i0 | PRJEB73599 | 843 | 822 | 2.448928 | 20.13018816 | Pelomyxa schiedti | 1580589 | Evosea | other_Eukaryota | 309 | 2.959999999999999e-101 | NR | KAH3743152.1 | 1580589 | g682 | i0 | 55.6 | 2.0036496350365 | 275 | 109 | 98.9 | 6 | 813 | 1 | 7 | 272 | KAH3743152.1 beta-1,3-glucan-binding protein [Pelomyxa schiedti] | diamond | 1647 | 309 | 1 | Eukaryota | Amoebozoa | Evosea | Pelobiontida | Pelomyxidae | Pelomyxa | Pelomyxa schiedti | |||
| 27413633 | 27413633 | PRJEB73599_P_NODE_2863_length_430_cov_2.301746_g2584_i0 | PRJEB73599 | 2863 | 430 | 2.301746 | 9.8975078 | Dictyostelium discoideum AX4 | 352472 | Evosea | other_Eukaryota | 50.8 | 3.88e-4 | NR | XP_638796.1 | 352472 | g2584 | i0 | 43.1 | 0.453488372093023 | 65 | 31 | 45.3 | 2 | 212 | 18 | 219 | 277 | XP_638796.1 heat shock protein Hsp20 domain-containing protein [Dictyostelium discoideum AX4] | diamond | 195 | 50.8 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 28960794 | 28960794 | PRJEB73599_P_NODE_5648_length_264_cov_2.268085_g5361_i0 | PRJEB73599 | 5648 | 264 | 2.268085 | 5.9877444 | Pelomyxa schiedti | 1580589 | Evosea | other_Eukaryota | 103 | 5.09e-24 | NR | KAH3743152.1 | 1580589 | g5361 | i0 | 69 | 0.659090909090909 | 58 | 18 | 65.9 | 0 | 6 | 179 | 271 | 328 | KAH3743152.1 beta-1,3-glucan-binding protein [Pelomyxa schiedti] | diamond | 174 | 103 | 1 | Eukaryota | Amoebozoa | Evosea | Pelobiontida | Pelomyxidae | Pelomyxa | Pelomyxa schiedti | |||
| 29497255 | 29497255 | PRJEB73599_P_NODE_4370_length_325_cov_2.388514_g4083_i0 | PRJEB73599 | 4370 | 325 | 2.388514 | 7.7626705 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 180 | 7.04e-53 | NR | XP_004336605.1 | 1257118 | g4083 | i0 | 80.2 | 7.84615384615385 | 106 | 21 | 97.8 | 0 | 320 | 3 | 176 | 281 | XP_004336605.1 atpdependent rna helicase ddx6, putative [Acanthamoeba castellanii str. Neff] | diamond | 2550 | 180 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 29970945 | 29970945 | PRJEB73599_P_NODE_1011_length_749_cov_2.962500_g834_i0 | PRJEB73599 | 1011 | 749 | 2.9625 | 22.189125 | Polysphondylium violaceum | 133409 | Evosea | other_Eukaryota | 219 | 5.51e-66 | NR | KAF2071097.1 | 133409 | g834 | i0 | 52 | 0.901201602136182 | 225 | 98 | 88.1 | 4 | 749 | 90 | 117 | 336 | KAF2071097.1 hypothetical protein CYY_007583 [Polysphondylium violaceum] | diamond | 675 | 219 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Polysphondylium | Polysphondylium violaceum | ||
| 31393100 | 31393100 | PRJEB73599_P_NODE_2796_length_436_cov_2.051597_g2517_i0 | PRJEB73599 | 2796 | 436 | 2.051597 | 8.94496292 | Dictyostelium discoideum AX4 | 352472 | Evosea | other_Eukaryota | 50.8 | 4.1e-4 | NR | XP_638796.1 | 352472 | g2517 | i0 | 43.1 | 0.447247706422018 | 65 | 31 | 44.7 | 2 | 212 | 18 | 219 | 277 | XP_638796.1 heat shock protein Hsp20 domain-containing protein [Dictyostelium discoideum AX4] | diamond | 195 | 50.8 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 32183877 | 32183877 | PRJEB73599_P_NODE_938_length_776_cov_2.492637_g682_i1 | PRJEB73599 | 938 | 776 | 2.492637 | 19.34286312 | Pelomyxa schiedti | 1580589 | Evosea | other_Eukaryota | 259 | 5.319999999999998e-82 | NR | KAH3743152.1 | 1580589 | g682 | i1 | 58.5 | 2.40850515463918 | 207 | 81 | 80 | 3 | 5 | 625 | 127 | 328 | KAH3743152.1 beta-1,3-glucan-binding protein [Pelomyxa schiedti] | diamond | 1869 | 259 | 1 | Eukaryota | Amoebozoa | Evosea | Pelobiontida | Pelomyxidae | Pelomyxa | Pelomyxa schiedti |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;