RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB66218" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB66218 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28360386 28360386 PRJEB66218_P_NODE_246186_length_193_cov_2.689394_g243754_i0 PRJEB66218 246186 193 2.689394 5.19053042 Rhodothermaceae bacterium 2026787 Bacteria Bacteria 46.2 5.04e-4   NR MBX2820919.1 2026787 g243754 i0 36.4 1.0259067357513 66 39 97.9 3 193 5 29 94 MBX2820919.1 hypothetical protein [Rhodothermaceae bacterium] diamond 198 46.2 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium
28455353 28455353 PRJEB66218_P_NODE_114946_length_282_cov_1.176471_g112517_i0 PRJEB66218 114946 282 1.176471 3.31764822 Rhodothermales bacterium 2306054 Bacteria Bacteria 46.6 0.00261   NR NNF05114.1 2306054 g112517 i0 34.2 0.840425531914894 79 47 79.8 3 276 52 64 141 NNF05114.1 glycosyl hydrolase [Rhodothermales bacterium] diamond 237 46.6 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
31614241 31614241 PRJEB66218_P_NODE_217876_length_207_cov_0.890411_g215446_i0 PRJEB66218 217876 207 0.890411 1.84315077 Rhodothermales bacterium 2306054 Bacteria Bacteria 94.7 1.17e-20   NR MBE2185581.1 2306054 g215446 i0 69.6 1 69 21 100 0 207 1 382 450 MBE2185581.1 hypothetical protein [Rhodothermales bacterium] diamond 207 94.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
32815245 32815245 PRJEB66218_P_NODE_198640_length_211_cov_0.866667_g196210_i0 PRJEB66218 198640 211 0.866667 1.82866737 Longimonas halophila 1469170 Bacteria Bacteria 99 1.2699999999999999e-24   NR WP_098061232.1 1469170 g196210 i0 62.3 0.981042654028436 69 25 98.1 1 209 3 12 79 WP_098061232.1 group I intron-associated PD-(D/E)XK endonuclease [Longimonas halophila] diamond 207 99 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salisaetaceae Longimonas Longimonas halophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;