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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJEB66218" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJEB66218 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
133843 133843 PRJEB66218_P_NODE_57921_length_435_cov_1.529412_g55501_i0 PRJEB66218 57921 435 1.529412 6.6529422 Armatimonadota bacterium 2033014 Bacteria Bacteria 96.7 3.3700000000000003e-22   NR MDH7482967.1 2033014 g55501 i0 67.6 1.87586206896552 68 22 46.9 0 232 435 1 68 MDH7482967.1 GNAT family N-acetyltransferase [Armatimonadota bacterium] diamond 816 96.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
15434919 15434919 PRJEB66218_P_NODE_213373_length_208_cov_0.884354_g210943_i0 PRJEB66218 213373 208 0.884354 1.83945632 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 147 8.13e-43   NR MFN3690895.1 2682145 g210943 i0 100 0.980769230769231 68 0 98.1 0 206 3 3 70 MFN3690895.1 cysteine hydrolase family protein [Fimbriimonadales bacterium] diamond 204 147 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
16711527 16711527 PRJEB66218_P_NODE_99874_length_307_cov_1.414634_g97446_i0 PRJEB66218 99874 307 1.414634 4.34292638 Armatimonadota bacterium 2033014 Bacteria Bacteria 173 5.32e-50   NR MBI3926320.1 2033014 g97446 i0 85.1 3.94788273615635 101 15 98.7 0 305 3 268 368 MBI3926320.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Armatimonadota bacterium] diamond 1212 173 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26717071 26717071 PRJEB66218_P_NODE_222841_length_206_cov_0.896552_g220411_i0 PRJEB66218 222841 206 0.896552 1.84689712 Armatimonadota bacterium 2033014 Bacteria Bacteria 145 3.52e-40   NR MCL6531677.1 2033014 g220411 i0 100 0.990291262135922 68 0 99 0 205 2 225 292 MCL6531677.1 lipid-A-disaccharide synthase [Armatimonadota bacterium] diamond 204 145 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26812562 26812562 PRJEB66218_P_NODE_221_length_8282_cov_10.627418_g161_i0 PRJEB66218 221 8282 10.627418 880.16275876 Armatimonadota bacterium 2033014 Bacteria Bacteria 139 7.79e-33   NR NOG38506.1 2033014 g161 i0 42.7 0.0670127988408597 185 95 6.5 4 56 592 17 196 NOG38506.1 hypothetical protein [Armatimonadota bacterium] diamond 555 139 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26970617 26970617 PRJEB66218_P_NODE_198582_length_211_cov_0.866667_g196152_i0 PRJEB66218 198582 211 0.866667 1.82866737 Armatimonas sp. 1872638 Bacteria Bacteria 72.4 6.34e-13   NR WP_309718863.1 1872638 g196152 i0 52.2 2.94312796208531 69 31 98.1 2 1 207 162 228 WP_309718863.1 RNA ligase (ATP) [Armatimonas sp.] diamond 621 72.4 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
30476525 30476525 PRJEB66218_P_NODE_207233_length_209_cov_0.878378_g204803_i0 PRJEB66218 207233 209 0.878378 1.83581002 Armatimonadota bacterium 2033014 Bacteria Bacteria 75.1 8.81e-14   NR MCC7439593.1 2033014 g204803 i0 64.5 0.889952153110048 62 21 87.6 1 188 6 21 82 MCC7439593.1 FAD-dependent monooxygenase [Armatimonadota bacterium] diamond 186 75.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30539488 30539488 PRJEB66218_P_NODE_145133_length_246_cov_1.135135_g142704_i0 PRJEB66218 145133 246 1.135135 2.7924321 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 43.1 0.0276   NR HET6645382.1 2682145 g142704 i0 35.6 0.719512195121951 59 31 63.4 1 209 54 14 72 HET6645382.1 phospholipase D-like domain-containing protein [Fimbriimonadales bacterium] diamond 177 43.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
30792257 30792257 PRJEB66218_P_NODE_153054_length_239_cov_1.674157_g150625_i0 PRJEB66218 153054 239 1.674157 4.00123523 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 124 2.9699999999999997e-35   NR MFN3690896.1 2682145 g150625 i0 96.8 0.790794979079498 63 2 79.1 0 233 45 1 63 MFN3690896.1 hypothetical protein [Fimbriimonadales bacterium] diamond 189 124 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
31670324 31670324 PRJEB66218_P_NODE_135297_length_256_cov_1.333333_g132868_i0 PRJEB66218 135297 256 1.333333 3.41333248 Bacteria 2 Bacteria Bacteria 53.9 4e-6   NR GDX39766.1 2033014 g132868 i0 43 3.515625 79 38 91.4 3 5 238 63 135 GDX39766.1 nucleotide pyrophosphatase [Armatimonadota bacterium] diamond 900 53.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32682023 32682023 PRJEB66218_P_NODE_80360_length_352_cov_2.006873_g77934_i0 PRJEB66218 80360 352 2.006873 7.06419296 PVC group 1783257 Bacteria Bacteria 45.8 0.0111   NR HEY3378350.1 2033014 g77934 i0 36.7 3.40909090909091 98 58 81.8 4 37 324 999 1094 HEY3378350.1 fibronectin type III domain-containing protein [Armatimonadota bacterium] diamond 1200 46.2 0.991341991341991 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;