RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJEB66218" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 11 ✖

bioproject 1

  • PRJEB66218 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3959069 3959069 PRJEB66218_P_NODE_25164_length_755_cov_1.550432_g22948_i0 PRJEB66218 25164 755 1.550432 11.7057616 root 1 Root_unresolved Root_unresolved 90.5 1.72e-16   NR WP_321506807.1 1005933 g22948 i0 37.9 2.53907284768212 161 80 62.8 6 15 488 2935 3078 WP_321506807.1 DUF3821 domain-containing protein [uncultured Methanoregula sp.] diamond 1917 90.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
26781029 26781029 PRJEB66218_P_NODE_97601_length_311_cov_1.804000_g95173_i0 PRJEB66218 97601 311 1.804 5.61044 Natrinema soli 1930624 Archaea Archaea 60.8 3.35e-8   NR WP_273737973.1 1930624 g95173 i0 60 2.56591639871383 45 18 43.4 0 310 176 351 395 WP_273737973.1 cystathionine gamma-synthase [Natrinema soli] diamond 798 60.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema soli
27026845 27026845 PRJEB66218_P_NODE_34962_length_607_cov_4.576923_g32586_i0 PRJEB66218 34962 607 4.576923 27.78192261 Methanoculleus 45989 Archaea Archaea 50.4 0.00126   NR WP_348532016.1 90427 g32586 i0 28.6 1.17627677100494 119 69 58.8 3 222 578 62 164 WP_348532016.1 kelch repeat-containing protein, partial [Methanoculleus sp.] diamond 714 50.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
27602964 27602964 PRJEB66218_P_NODE_38344_length_571_cov_1.849020_g35949_i0 PRJEB66218 38344 571 1.84902 10.5579042 Methanoregulaceae archaeon 2485498 Archaea Archaea 58.2 3.86e-6   NR MDD1719583.1 2485498 g35949 i0 36 1.38704028021016 89 55 45.7 1 301 561 66 154 MDD1719583.1 hypothetical protein [Methanoregulaceae archaeon] diamond 792 58.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
29686319 29686319 PRJEB66218_P_NODE_30_length_15996_cov_27.932852_g25_i0 PRJEB66218 30 15996 27.932852 4468.13900592 Methanoregulaceae archaeon 2485498 Archaea Archaea 97.8 4.24e-16   NR RPI38806.1 2485498 g25 i0 31.5 0.0481995498874719 257 156 4.7 9 15465 14707 89 329 RPI38806.1 MAG: hypothetical protein EHM53_07905 [Methanoregulaceae archaeon] diamond 771 97.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
29939471 29939471 PRJEB66218_P_NODE_73551_length_372_cov_3.710611_g71126_i0 PRJEB66218 73551 372 3.710611 13.80347292 Methanoregula sp. 2052170 Archaea Archaea 70.5 3.22e-11   NR MDD1700180.1 2052170 g71126 i0 34.5 0.959677419354839 119 70 91.1 3 22 360 285 401 MDD1700180.1 PKD domain-containing protein [Methanoregula sp.] diamond 357 70.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
30785198 30785198 PRJEB66218_P_NODE_71434_length_379_cov_2.754717_g69010_i0 PRJEB66218 71434 379 2.754717 10.44037743 root 1 Root_unresolved Root_unresolved 94.4 3.1200000000000004e-21   NR WP_006601361.1 2246 g69010 i0 53 7.50395778364116 115 44 90.2 4 37 378 3 108 WP_006601361.1 cysteine hydrolase family protein [Haloferax volcanii] diamond 2844 94.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax volcanii
30823944 30823944 PRJEB66218_P_NODE_235834_length_203_cov_0.915493_g233403_i0 PRJEB66218 235834 203 0.915493 1.85845079 Methanoculleus frigidifontis 2584085 Archaea Archaea 67.4 4.28e-11   NR WP_301663031.1 2584085 g233403 i0 44.8 1.98029556650246 67 37 99 0 201 1 131 197 WP_301663031.1 glycosyltransferase [Methanoculleus frigidifontis] diamond 402 67.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus frigidifontis
31171169 31171169 PRJEB66218_P_NODE_135475_length_256_cov_1.000000_g133046_i0 PRJEB66218 135475 256 1 2.56 Methanomicrobiales archaeon HGW-Methanomicrobiales-4 2013820 Archaea Archaea 46.6 0.00178   NR PKL60559.1 2013820 g133046 i0 45.3 0.62109375 53 20 51.6 2 12 143 85 137 PKL60559.1 MAG: mechanosensitive ion channel protein MscS [Methanomicrobiales archaeon HGW-Methanomicrobiales-4] diamond 159 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon HGW-Methanomicrobiales-4
31740658 31740658 PRJEB66218_P_NODE_35877_length_597_cov_2.761194_g33494_i0 PRJEB66218 35877 597 2.761194 16.48432818 Methanoculleus sp. 90427 Archaea Archaea 78.2 5.36e-13   NR WP_346733691.1 90427 g33494 i0 35.6 0.748743718592965 149 82 73.9 5 458 18 162 298 WP_346733691.1 kelch repeat-containing protein [Methanoculleus sp.] diamond 447 78.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
31835537 31835537 PRJEB66218_P_NODE_90197_length_327_cov_1.710526_g87770_i0 PRJEB66218 90197 327 1.710526 5.59342002 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 66.2 4.08e-10   NR NJD76986.1 2032688 g87770 i0 30.8 1.96330275229358 107 66 98.2 2 321 1 120 218 NJD76986.1 hypothetical protein [Candidatus Methanoperedens sp.] diamond 642 66.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;