RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB6584" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32946595 32946595 PRJEB6584o_S_NODE_2930_length_424_cov_21.185090_g2823_i0 PRJEB6584 2930 424 21.18509 89.8247816 Streblomastix strix 222440 Preaxostyla other_Eukaryota 68.2 3.6e-11   NR KAA6388004.1 222440 g2823 i0 59.6 0.332547169811321 47 19 33.3 0 4 144 120 166 KAA6388004.1 MAG: putative Translationally-controlled tumor protein [Streblomastix strix] diamond 141 68.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
33110869 33110869 PRJEB6584o_S_NODE_3318_length_409_cov_90.641711_g3210_i0 PRJEB6584 3318 409 90.641711 370.72459799 Monocercomonoides 302781 Preaxostyla other_Eukaryota 80.9 8.18e-16   NR ABU93327.1 302782 g3210 i0 58.6 5.8239608801956 70 29 51.3 0 405 196 123 192 ABU93327.1 translation elongation factor-1 alpha, partial [Monocercomonoides sp. PA] diamond 2382 80.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides sp. PA
33116953 33116953 PRJEB6584o_S_NODE_11727_length_256_cov_13.022624_g11619_i0 PRJEB6584 11727 256 13.022624 33.33791744 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 63.9 1.02e-10   NR KAK2962684.1 2049346 g11619 i0 45.5 1.53515625 66 35 77.3 1 3 200 62 126 KAK2962684.1 putative 60S ribosomal protein L31 [Blattamonas nauphoetae] diamond 393 63.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
33168116 33168116 PRJEB6584o_S_NODE_12328_length_250_cov_3.804651_g12220_i0 PRJEB6584 12328 250 3.804651 9.5116275 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 81.3 4.08e-17   NR XP_067730312.1 2049356 g12220 i0 53.4 0.876 73 31 87.6 2 3 221 98 167 XP_067730312.1 putative translationally controlled tumor protein [Monocercomonoides exilis] diamond 219 81.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;