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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJEB6584" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6584 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25795794 25795794 PRJEB6584h_S_NODE_4003_length_265_cov_6.186957_g3941_i0 PRJEB6584 4003 265 6.186957 16.39543605 Metazoa 33208 Nematoda Nematoda 96.3 6.71e-21   NR KJH49928.1 29172 g3941 i0 81.1 10.6075471698113 53 10 60 0 244 86 490 542 KJH49928.1 glucose-6-phosphate isomerase [Dictyocaulus viviparus] diamond 2811 97.1 0.991761071060762 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Dictyocaulus Dictyocaulus viviparus
25796204 25796204 PRJEB6584o_S_NODE_10219_length_273_cov_2.495798_g10111_i0 PRJEB6584 10219 273 2.495798 6.81352854 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 81.3 1.34e-16   NR XP_042936859.1 6279 g10111 i0 75 124.230769230769 56 14 61.5 0 25 192 70 125 XP_042936859.1 histone H2A, putative [Brugia malayi] diamond 33915 82 0.991463414634146 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia malayi
32911926 32911926 PRJEB6584e_S_NODE_1969_length_204_cov_2.479290_g1954_i0 PRJEB6584 1969 204 2.47929 5.0577516 Caenorhabditis angaria 860376 Nematoda Nematoda 53.9 6.69e-7   NR CAI5440445.1 860376 g1954 i0 50.9 0.779411764705882 53 26 77.9 0 18 176 63 115 CAI5440445.1 unnamed protein product [Caenorhabditis angaria] diamond 159 53.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
32911942 32911942 PRJEB6584h_S_NODE_2833_length_296_cov_4.900383_g2771_i0 PRJEB6584 2833 296 4.900383 14.50513368 Strongyloides ratti 34506 Nematoda Nematoda 104 3.7e-24   NR XP_024501374.1 34506 g2771 i0 87.5 0.567567567567568 56 7 56.8 0 199 32 1 56 XP_024501374.1 Hsp90 co-chaperone Cdc37 [Strongyloides ratti] diamond 168 104 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
32912126 32912126 PRJEB6584o_S_NODE_14873_length_229_cov_2.371134_g14765_i0 PRJEB6584 14873 229 2.371134 5.42989686 Aphelenchoides avenae 70226 Nematoda Nematoda 112 2.6399999999999998e-28   NR KAH7708129.1 70226 g14765 i0 70.8 3.77292576419214 72 21 94.3 0 224 9 182 253 KAH7708129.1 40S ribosomal protein S4 [Aphelenchoides avenae] diamond 864 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
32929587 32929587 PRJEB6584o_S_NODE_44777_length_169_cov_1.194030_g44669_i0 PRJEB6584 44777 169 1.19403 2.0179107 Angiostrongylus cantonensis 6313 Nematoda Nematoda 41.6 0.0355   NR KAE9417123.1 6313 g44669 i0 44.2 0.923076923076923 52 28 92.3 1 166 11 277 327 KAE9417123.1 hypothetical protein Angca_008161, partial [Angiostrongylus cantonensis] diamond 156 41.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
32940209 32940209 PRJEB6584h_S_NODE_2473_length_308_cov_3.058608_g2411_i0 PRJEB6584 2473 308 3.058608 9.42051264 Metazoa 33208 Nematoda Nematoda 149 5.77e-44   NR VDM28106.1 6265 g2411 i0 82.3 7.81168831168831 79 14 76.9 0 304 68 58 136 VDM28106.1 unnamed protein product [Toxocara canis] diamond 2406 149 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
32940249 32940249 PRJEB6584o_S_NODE_15937_length_222_cov_2.962567_g15829_i0 PRJEB6584 15937 222 2.962567 6.57689874 Opisthokonta 33154 Nematoda Nematoda 85.9 1.52e-18   NR VDP12526.1 6339 g15829 i0 69 4.7027027027027 58 18 78.4 0 220 47 152 209 VDP12526.1 unnamed protein product [Heligmosomoides polygyrus] diamond 1044 86.3 0.995365005793743 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
33008548 33008548 PRJEB6584o_S_NODE_26283_length_187_cov_3.118421_g26175_i0 PRJEB6584 26283 187 3.118421 5.83144727 Metazoa 33208 Nematoda Nematoda 70.5 6.76e-14   NR VDL80748.1 27835 g26175 i0 66.7 6.85026737967914 45 13 70.6 2 171 40 58 101 VDL80748.1 unnamed protein product [Nippostrongylus brasiliensis] diamond 1281 71.2 0.990168539325843 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Nippostrongylus Nippostrongylus brasiliensis
33076714 33076714 PRJEB6584o_S_NODE_10269_length_272_cov_7.219409_g10161_i0 PRJEB6584 10269 272 7.219409 19.63679248 Metazoa 33208 Nematoda Nematoda 103 1.1699999999999997e-23   NR CAJ0582755.1 96644 g10161 i0 57.8 1.83088235294118 83 34 91.5 1 23 271 371 452 CAJ0582755.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 498 104 0.990384615384615 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
33110889 33110889 PRJEB6584o_S_NODE_76430_length_154_cov_5.705882_g76322_i0 PRJEB6584 76430 154 5.705882 8.78705828 Rhabditida 6236 Nematoda Nematoda 40.4 0.0296   NR VDO24364.1 6339 g76322 i0 54.5 1.28571428571429 33 15 64.3 0 101 3 63 95 VDO24364.1 unnamed protein product [Heligmosomoides polygyrus] diamond 198 40.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
33167942 33167942 PRJEB6584e_S_NODE_2264_length_193_cov_1.405063_g2249_i0 PRJEB6584 2264 193 1.405063 2.71177159 Steinernema carpocapsae 34508 Nematoda Nematoda 45.1 0.00142   NR TKR92981.1 34508 g2249 i0 60 1.86528497409326 40 16 62.2 0 55 174 15 54 TKR92981.1 hypothetical protein L596_007523 [Steinernema carpocapsae] diamond 360 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;