RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB6584" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26340067 26340067 PRJEB6584e_S_NODE_3111_length_170_cov_3.459259_g3096_i0 PRJEB6584 3111 170 3.459259 5.8807403 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 79.7 8.63e-16   NR MES1909649.1 1215613 g3096 i0 69.6 0.988235294117647 56 17 98.8 0 170 3 8 63 MES1909649.1 Fructose-bisphosphate aldolase 6, cytosolic [Cercozoa sp. M6MM] diamond 168 79.7 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32997417 32997417 PRJEB6584d_S_NODE_10203_length_191_cov_1.935897_g10135_i0 PRJEB6584 10203 191 1.935897 3.69756327 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 58.9 3.85e-9   NR MES1912234.1 1215613 g10135 i0 61 1.28795811518325 41 14 64.4 1 8 130 82 120 MES1912234.1 hypothetical protein [Cercozoa sp. M6MM] diamond 246 58.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
33014622 33014622 PRJEB6584o_S_NODE_11532_length_258_cov_29.165919_g11424_i0 PRJEB6584 11532 258 29.165919 75.24807102 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 88.2 4.51e-21   NR MES1911722.1 1215613 g11424 i0 73.1 0.604651162790698 52 14 60.5 0 229 74 1 52 MES1911722.1 hypothetical protein [Cercozoa sp. M6MM] diamond 156 88.2 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
33100406 33100406 PRJEB6584o_S_NODE_8950_length_288_cov_260.948617_g8842_i0 PRJEB6584 8950 288 260.948617 751.53201696 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 82.8 8.98e-19   NR MES1911722.1 1215613 g8842 i0 69.2 0.541666666666667 52 16 54.2 0 268 113 1 52 MES1911722.1 hypothetical protein [Cercozoa sp. M6MM] diamond 156 82.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;