RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJEB6584" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJEB6584 · 5 ✖

analysis 1

  • diamond · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32911966 32911966 PRJEB6584j_S_NODE_5345_length_200_cov_1.933333_g5316_i0 PRJEB6584 5345 200 1.933333 3.866666 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 63.5 1.72e-10   NR MBX9724270.1 2364082 g5316 i0 100 0.435 29 0 43.5 0 200 114 142 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 87 63.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
32929166 32929166 PRJEB6584i_S_NODE_10049_length_155_cov_1.858333_g10037_i0 PRJEB6584 10049 155 1.858333 2.88041615 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 63.9 2.16e-11   NR PZM84364.1 2052166 g10037 i0 76.3 0.735483870967742 38 9 73.5 0 17 130 78 115 PZM84364.1 MAG: hypothetical protein DKT66_06930 [Candidatus Melainabacteria bacterium] diamond 114 63.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
32929373 32929373 PRJEB6584o_S_NODE_17641_length_213_cov_1.955056_g17533_i0 PRJEB6584 17641 213 1.955056 4.16426928 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 78.6 1.47e-16   NR MBX9722668.1 2364082 g17533 i0 73.1 0.732394366197183 52 14 73.2 0 1 156 86 137 MBX9722668.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 156 78.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
33032287 33032287 PRJEB6584p_S_NODE_52804_length_158_cov_1.626016_g52773_i0 PRJEB6584 52804 158 1.626016 2.56910528 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 63.5 3.18e-11   NR PZM84364.1 2052166 g52773 i0 76.3 0.721518987341772 38 9 72.2 0 20 133 78 115 PZM84364.1 MAG: hypothetical protein DKT66_06930 [Candidatus Melainabacteria bacterium] diamond 114 63.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
33048421 33048421 PRJEB6584a_S_NODE_7397_length_164_cov_4.720930_g7377_i0 PRJEB6584 7397 164 4.72093 7.7423252 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 48.9 1.82e-5   NR PZM84364.1 2052166 g7377 i0 64.1 0.713414634146341 39 14 71.3 0 19 135 76 114 PZM84364.1 MAG: hypothetical protein DKT66_06930 [Candidatus Melainabacteria bacterium] diamond 117 48.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;