RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB6584" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32991606 32991606 PRJEB6584e_S_NODE_2643_length_181_cov_1.876712_g2628_i0 PRJEB6584 2643 181 1.876712 3.39684872 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 64.7 1.24e-11   NR CEL74828.1 432359 g2628 i0 54.7 2.6353591160221 53 24 87.8 0 161 3 29 81 CEL74828.1 TPA: R1 protein [Toxoplasma gondii VEG] diamond 477 64.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
33082733 33082733 PRJEB6584f_S_NODE_2550_length_194_cov_2.591195_g2544_i0 PRJEB6584 2550 194 2.591195 5.0269183 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 52 1.05e-5   NR KAF8822671.1 476202 g2544 i0 79.3 2.69072164948454 29 6 44.8 0 193 107 574 602 KAF8822671.1 thioredoxin reductase [Cardiosporidium cionae] diamond 522 52 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;